Protein–RNA interactions for Protein: Q8WU17

RNF139, E3 ubiquitin-protein ligase RNF139, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139Q8WU17 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF139Q8WU17 IGHV3-47-201ENST00000425060 335 ntBASIC18.72■□□□□ 0.59
RNF139Q8WU17 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC18.72■□□□□ 0.59
RNF139Q8WU17 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC18.72■□□□□ 0.59
RNF139Q8WU17 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC18.72■□□□□ 0.59
RNF139Q8WU17 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC18.72■□□□□ 0.59
RNF139Q8WU17 AC012313.10-201ENST00000623509 926 ntBASIC18.72■□□□□ 0.59
RNF139Q8WU17 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF139Q8WU17 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC18.72■□□□□ 0.59
RNF139Q8WU17 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC18.72■□□□□ 0.59
RNF139Q8WU17 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
RNF139Q8WU17 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF139Q8WU17 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF139Q8WU17 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
RNF139Q8WU17 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
RNF139Q8WU17 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF139Q8WU17 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF139Q8WU17 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF139Q8WU17 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF139Q8WU17 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF139Q8WU17 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF139Q8WU17 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC18.71■□□□□ 0.59
RNF139Q8WU17 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF139Q8WU17 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF139Q8WU17 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
RNF139Q8WU17 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF139Q8WU17 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC18.71■□□□□ 0.59
RNF139Q8WU17 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF139Q8WU17 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF139Q8WU17 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RNF139Q8WU17 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF139Q8WU17 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
RNF139Q8WU17 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RNF139Q8WU17 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC18.71■□□□□ 0.59
RNF139Q8WU17 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
RNF139Q8WU17 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC18.71■□□□□ 0.59
RNF139Q8WU17 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC18.71■□□□□ 0.59
RNF139Q8WU17 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC18.71■□□□□ 0.59
RNF139Q8WU17 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RNF139Q8WU17 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC18.71■□□□□ 0.59
RNF139Q8WU17 AC138894.3-201ENST00000603787 634 ntBASIC18.71■□□□□ 0.59
RNF139Q8WU17 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RNF139Q8WU17 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.59
RNF139Q8WU17 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF139Q8WU17 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
RNF139Q8WU17 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
RNF139Q8WU17 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF139Q8WU17 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF139Q8WU17 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF139Q8WU17 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF139Q8WU17 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC18.71■□□□□ 0.59
RNF139Q8WU17 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC18.71■□□□□ 0.59
RNF139Q8WU17 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF139Q8WU17 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF139Q8WU17 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF139Q8WU17 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
RNF139Q8WU17 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC18.71■□□□□ 0.58
RNF139Q8WU17 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF139Q8WU17 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF139Q8WU17 NOC2LP2-201ENST00000407594 1944 ntBASIC18.7■□□□□ 0.58
RNF139Q8WU17 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC18.7■□□□□ 0.58
RNF139Q8WU17 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF139Q8WU17 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
RNF139Q8WU17 AC008764.6-201ENST00000595909 2069 ntBASIC18.7■□□□□ 0.58
RNF139Q8WU17 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF139Q8WU17 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF139Q8WU17 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RNF139Q8WU17 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
RNF139Q8WU17 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF139Q8WU17 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
RNF139Q8WU17 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RNF139Q8WU17 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF139Q8WU17 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF139Q8WU17 CD276-203ENST00000537340 2439 ntTSL 2 BASIC18.7■□□□□ 0.58
RNF139Q8WU17 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF139Q8WU17 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF139Q8WU17 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
RNF139Q8WU17 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
RNF139Q8WU17 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RNF139Q8WU17 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF139Q8WU17 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC18.7■□□□□ 0.58
RNF139Q8WU17 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RNF139Q8WU17 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF139Q8WU17 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RNF139Q8WU17 FOSL1P1-201ENST00000511041 816 ntBASIC18.7■□□□□ 0.58
RNF139Q8WU17 TOLLIP-AS1-201ENST00000530897 939 ntBASIC18.7■□□□□ 0.58
RNF139Q8WU17 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC18.7■□□□□ 0.58
RNF139Q8WU17 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC18.7■□□□□ 0.58
RNF139Q8WU17 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC18.7■□□□□ 0.58
RNF139Q8WU17 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
RNF139Q8WU17 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF139Q8WU17 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
RNF139Q8WU17 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF139Q8WU17 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF139Q8WU17 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC18.7■□□□□ 0.58
RNF139Q8WU17 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF139Q8WU17 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF139Q8WU17 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
RNF139Q8WU17 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
RNF139Q8WU17 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms