Protein–RNA interactions for Protein: Q8TEC5

SH3RF2, Putative E3 ubiquitin-protein ligase SH3RF2, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF2Q8TEC5 LITAF-211ENST00000572255 516 ntTSL 4 BASIC18.46■□□□□ 0.55
SH3RF2Q8TEC5 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC18.46■□□□□ 0.55
SH3RF2Q8TEC5 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SH3RF2Q8TEC5 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SH3RF2Q8TEC5 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC18.46■□□□□ 0.55
SH3RF2Q8TEC5 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SH3RF2Q8TEC5 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.46■□□□□ 0.55
SH3RF2Q8TEC5 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SH3RF2Q8TEC5 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SH3RF2Q8TEC5 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SH3RF2Q8TEC5 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SH3RF2Q8TEC5 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
SH3RF2Q8TEC5 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SH3RF2Q8TEC5 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SH3RF2Q8TEC5 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SH3RF2Q8TEC5 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
SH3RF2Q8TEC5 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
SH3RF2Q8TEC5 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SH3RF2Q8TEC5 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
SH3RF2Q8TEC5 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.54
SH3RF2Q8TEC5 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
SH3RF2Q8TEC5 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
SH3RF2Q8TEC5 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
SH3RF2Q8TEC5 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SH3RF2Q8TEC5 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
SH3RF2Q8TEC5 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SH3RF2Q8TEC5 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC18.45■□□□□ 0.54
SH3RF2Q8TEC5 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
SH3RF2Q8TEC5 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SH3RF2Q8TEC5 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC18.45■□□□□ 0.54
SH3RF2Q8TEC5 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC18.45■□□□□ 0.54
SH3RF2Q8TEC5 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.45■□□□□ 0.54
SH3RF2Q8TEC5 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
SH3RF2Q8TEC5 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC18.45■□□□□ 0.54
SH3RF2Q8TEC5 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC18.45■□□□□ 0.54
SH3RF2Q8TEC5 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SH3RF2Q8TEC5 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
SH3RF2Q8TEC5 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SH3RF2Q8TEC5 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC18.45■□□□□ 0.54
SH3RF2Q8TEC5 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SH3RF2Q8TEC5 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SH3RF2Q8TEC5 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SH3RF2Q8TEC5 RPS2P28-201ENST00000314255 741 ntBASIC18.45■□□□□ 0.54
SH3RF2Q8TEC5 AC096633.1-201ENST00000422446 749 ntBASIC18.45■□□□□ 0.54
SH3RF2Q8TEC5 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC18.45■□□□□ 0.54
SH3RF2Q8TEC5 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC18.45■□□□□ 0.54
SH3RF2Q8TEC5 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC18.45■□□□□ 0.54
SH3RF2Q8TEC5 SRP19-202ENST00000445150 833 ntTSL 2 BASIC18.45■□□□□ 0.54
SH3RF2Q8TEC5 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC18.45■□□□□ 0.54
SH3RF2Q8TEC5 DUTP2-201ENST00000519164 463 ntBASIC18.45■□□□□ 0.54
SH3RF2Q8TEC5 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC18.45■□□□□ 0.54
SH3RF2Q8TEC5 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC18.45■□□□□ 0.54
SH3RF2Q8TEC5 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
SH3RF2Q8TEC5 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC18.45■□□□□ 0.54
SH3RF2Q8TEC5 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC18.45■□□□□ 0.54
SH3RF2Q8TEC5 AC010460.3-201ENST00000511359 1579 ntBASIC18.45■□□□□ 0.54
SH3RF2Q8TEC5 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SH3RF2Q8TEC5 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC18.45■□□□□ 0.54
SH3RF2Q8TEC5 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SH3RF2Q8TEC5 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SH3RF2Q8TEC5 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
SH3RF2Q8TEC5 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.45■□□□□ 0.54
SH3RF2Q8TEC5 AC022898.2-201ENST00000616822 1312 ntBASIC18.45■□□□□ 0.54
SH3RF2Q8TEC5 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC18.45■□□□□ 0.54
SH3RF2Q8TEC5 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC18.45■□□□□ 0.54
SH3RF2Q8TEC5 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SH3RF2Q8TEC5 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SH3RF2Q8TEC5 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SH3RF2Q8TEC5 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SH3RF2Q8TEC5 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC18.45■□□□□ 0.54
SH3RF2Q8TEC5 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SH3RF2Q8TEC5 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SH3RF2Q8TEC5 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SH3RF2Q8TEC5 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SH3RF2Q8TEC5 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.44■□□□□ 0.54
SH3RF2Q8TEC5 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SH3RF2Q8TEC5 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SH3RF2Q8TEC5 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC18.44■□□□□ 0.54
SH3RF2Q8TEC5 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
SH3RF2Q8TEC5 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
SH3RF2Q8TEC5 AL354751.1-201ENST00000412768 1863 ntBASIC18.44■□□□□ 0.54
SH3RF2Q8TEC5 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC18.44■□□□□ 0.54
SH3RF2Q8TEC5 AL390961.4-201ENST00000623958 2535 ntBASIC18.44■□□□□ 0.54
SH3RF2Q8TEC5 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC18.44■□□□□ 0.54
SH3RF2Q8TEC5 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
SH3RF2Q8TEC5 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SH3RF2Q8TEC5 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
SH3RF2Q8TEC5 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
SH3RF2Q8TEC5 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC18.44■□□□□ 0.54
SH3RF2Q8TEC5 RPS2P1-201ENST00000434010 821 ntBASIC18.44■□□□□ 0.54
SH3RF2Q8TEC5 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
SH3RF2Q8TEC5 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
SH3RF2Q8TEC5 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC18.44■□□□□ 0.54
SH3RF2Q8TEC5 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC18.44■□□□□ 0.54
SH3RF2Q8TEC5 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC18.44■□□□□ 0.54
SH3RF2Q8TEC5 AC023511.2-201ENST00000618803 211 ntBASIC18.44■□□□□ 0.54
SH3RF2Q8TEC5 AL139288.1-201ENST00000623748 933 ntBASIC18.44■□□□□ 0.54
SH3RF2Q8TEC5 AP000867.4-201ENST00000641616 219 ntBASIC18.44■□□□□ 0.54
SH3RF2Q8TEC5 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SH3RF2Q8TEC5 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms