Protein–RNA interactions for Protein: Q8TDI0

CHD5, Chromodomain-helicase-DNA-binding protein 5, humanhuman

Predictions only

Length 1,954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD5Q8TDI0 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC17.95■□□□□ 0.46
CHD5Q8TDI0 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CHD5Q8TDI0 FGFR3P6-201ENST00000457012 610 ntBASIC17.95■□□□□ 0.46
CHD5Q8TDI0 WDR88-203ENST00000592765 651 ntTSL 5 BASIC17.95■□□□□ 0.46
CHD5Q8TDI0 AL121912.1-201ENST00000603683 238 ntBASIC17.95■□□□□ 0.46
CHD5Q8TDI0 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CHD5Q8TDI0 HLA-J-201ENST00000462773 1622 ntBASIC17.95■□□□□ 0.46
CHD5Q8TDI0 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CHD5Q8TDI0 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CHD5Q8TDI0 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
CHD5Q8TDI0 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CHD5Q8TDI0 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CHD5Q8TDI0 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
CHD5Q8TDI0 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CHD5Q8TDI0 CD276-203ENST00000537340 2439 ntTSL 2 BASIC17.95■□□□□ 0.46
CHD5Q8TDI0 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CHD5Q8TDI0 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC17.94■□□□□ 0.46
CHD5Q8TDI0 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CHD5Q8TDI0 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC17.94■□□□□ 0.46
CHD5Q8TDI0 MED16-201ENST00000269814 1199 ntTSL 5 BASIC17.94■□□□□ 0.46
CHD5Q8TDI0 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CHD5Q8TDI0 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC17.94■□□□□ 0.46
CHD5Q8TDI0 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CHD5Q8TDI0 AP002469.2-201ENST00000531724 424 ntBASIC17.94■□□□□ 0.46
CHD5Q8TDI0 MIR5100-201ENST00000579544 119 ntBASIC17.94■□□□□ 0.46
CHD5Q8TDI0 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CHD5Q8TDI0 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CHD5Q8TDI0 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CHD5Q8TDI0 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC17.94■□□□□ 0.46
CHD5Q8TDI0 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
CHD5Q8TDI0 AC133963.1-201ENST00000504166 1679 ntBASIC17.94■□□□□ 0.46
CHD5Q8TDI0 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CHD5Q8TDI0 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
CHD5Q8TDI0 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CHD5Q8TDI0 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC17.94■□□□□ 0.46
CHD5Q8TDI0 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
CHD5Q8TDI0 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
CHD5Q8TDI0 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CHD5Q8TDI0 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CHD5Q8TDI0 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CHD5Q8TDI0 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
CHD5Q8TDI0 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC17.93■□□□□ 0.46
CHD5Q8TDI0 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC17.93■□□□□ 0.46
CHD5Q8TDI0 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CHD5Q8TDI0 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC17.93■□□□□ 0.46
CHD5Q8TDI0 AC132938.5-201ENST00000624980 1813 ntBASIC17.93■□□□□ 0.46
CHD5Q8TDI0 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CHD5Q8TDI0 LYSMD4-203ENST00000378904 2122 ntBASIC17.93■□□□□ 0.46
CHD5Q8TDI0 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CHD5Q8TDI0 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CHD5Q8TDI0 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CHD5Q8TDI0 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CHD5Q8TDI0 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CHD5Q8TDI0 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CHD5Q8TDI0 COX5BP2-201ENST00000392354 334 ntBASIC17.93■□□□□ 0.46
CHD5Q8TDI0 MIR7706-201ENST00000613747 67 ntBASIC17.93■□□□□ 0.46
CHD5Q8TDI0 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.93■□□□□ 0.46
CHD5Q8TDI0 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
CHD5Q8TDI0 AC009336.1-201ENST00000608941 1553 ntBASIC17.93■□□□□ 0.46
CHD5Q8TDI0 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CHD5Q8TDI0 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
CHD5Q8TDI0 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC17.92■□□□□ 0.46
CHD5Q8TDI0 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CHD5Q8TDI0 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC17.92■□□□□ 0.46
CHD5Q8TDI0 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CHD5Q8TDI0 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CHD5Q8TDI0 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
CHD5Q8TDI0 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CHD5Q8TDI0 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CHD5Q8TDI0 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
CHD5Q8TDI0 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC17.92■□□□□ 0.46
CHD5Q8TDI0 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC17.92■□□□□ 0.46
CHD5Q8TDI0 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC17.92■□□□□ 0.46
CHD5Q8TDI0 AC091304.2-201ENST00000564639 760 ntBASIC17.92■□□□□ 0.46
CHD5Q8TDI0 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC17.92■□□□□ 0.46
CHD5Q8TDI0 TMED1-207ENST00000591695 809 ntTSL 5 BASIC17.92■□□□□ 0.46
CHD5Q8TDI0 AL773604.1-201ENST00000617417 272 ntBASIC17.92■□□□□ 0.46
CHD5Q8TDI0 AC073592.4-201ENST00000623827 446 ntBASIC17.92■□□□□ 0.46
CHD5Q8TDI0 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC17.92■□□□□ 0.46
CHD5Q8TDI0 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC17.92■□□□□ 0.46
CHD5Q8TDI0 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CHD5Q8TDI0 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
CHD5Q8TDI0 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC17.92■□□□□ 0.46
CHD5Q8TDI0 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
CHD5Q8TDI0 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC17.92■□□□□ 0.46
CHD5Q8TDI0 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CHD5Q8TDI0 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
CHD5Q8TDI0 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC17.92■□□□□ 0.46
CHD5Q8TDI0 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CHD5Q8TDI0 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CHD5Q8TDI0 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CHD5Q8TDI0 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CHD5Q8TDI0 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC17.92■□□□□ 0.46
CHD5Q8TDI0 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CHD5Q8TDI0 ENSA-206ENST00000361631 725 ntTSL 2 BASIC17.91■□□□□ 0.46
CHD5Q8TDI0 MRPL3P1-201ENST00000400109 1033 ntBASIC17.91■□□□□ 0.46
CHD5Q8TDI0 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC17.91■□□□□ 0.46
CHD5Q8TDI0 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CHD5Q8TDI0 AL160237.2-201ENST00000556165 472 ntBASIC17.91■□□□□ 0.46
CHD5Q8TDI0 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms