Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC27.64■■■□□ 2.02
CFAP43Q8NDM7 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
CFAP43Q8NDM7 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
CFAP43Q8NDM7 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC27.64■■■□□ 2.02
CFAP43Q8NDM7 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC27.64■■■□□ 2.02
CFAP43Q8NDM7 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC27.64■■■□□ 2.02
CFAP43Q8NDM7 COX5A-202ENST00000562233 441 ntTSL 3 BASIC27.64■■■□□ 2.02
CFAP43Q8NDM7 AC005498.2-205ENST00000593218 784 ntBASIC27.64■■■□□ 2.02
CFAP43Q8NDM7 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
CFAP43Q8NDM7 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.01
CFAP43Q8NDM7 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC27.64■■■□□ 2.01
CFAP43Q8NDM7 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC27.64■■■□□ 2.01
CFAP43Q8NDM7 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC27.64■■■□□ 2.01
CFAP43Q8NDM7 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC27.64■■■□□ 2.01
CFAP43Q8NDM7 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC27.64■■■□□ 2.01
CFAP43Q8NDM7 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC27.64■■■□□ 2.01
CFAP43Q8NDM7 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
CFAP43Q8NDM7 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
CFAP43Q8NDM7 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
CFAP43Q8NDM7 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC27.63■■■□□ 2.01
CFAP43Q8NDM7 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC27.63■■■□□ 2.01
CFAP43Q8NDM7 CEND1P1-201ENST00000451006 455 ntBASIC27.63■■■□□ 2.01
CFAP43Q8NDM7 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC27.63■■■□□ 2.01
CFAP43Q8NDM7 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC27.63■■■□□ 2.01
CFAP43Q8NDM7 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC27.63■■■□□ 2.01
CFAP43Q8NDM7 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC27.63■■■□□ 2.01
CFAP43Q8NDM7 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC27.63■■■□□ 2.01
CFAP43Q8NDM7 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
CFAP43Q8NDM7 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
CFAP43Q8NDM7 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC27.63■■■□□ 2.01
CFAP43Q8NDM7 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
CFAP43Q8NDM7 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
CFAP43Q8NDM7 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
CFAP43Q8NDM7 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC27.63■■■□□ 2.01
CFAP43Q8NDM7 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC27.63■■■□□ 2.01
CFAP43Q8NDM7 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC27.62■■■□□ 2.01
CFAP43Q8NDM7 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC27.62■■■□□ 2.01
CFAP43Q8NDM7 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
CFAP43Q8NDM7 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
CFAP43Q8NDM7 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC27.62■■■□□ 2.01
CFAP43Q8NDM7 IGLL3P-201ENST00000412472 434 ntBASIC27.62■■■□□ 2.01
CFAP43Q8NDM7 SPDYE21P-201ENST00000413323 827 ntBASIC27.62■■■□□ 2.01
CFAP43Q8NDM7 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC27.62■■■□□ 2.01
CFAP43Q8NDM7 CCDC74BP1-201ENST00000508880 1123 ntBASIC27.62■■■□□ 2.01
CFAP43Q8NDM7 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC27.62■■■□□ 2.01
CFAP43Q8NDM7 MAL2-202ENST00000531508 892 ntTSL 3 BASIC27.62■■■□□ 2.01
CFAP43Q8NDM7 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC27.62■■■□□ 2.01
CFAP43Q8NDM7 AC010507.1-201ENST00000633895 436 ntBASIC27.62■■■□□ 2.01
CFAP43Q8NDM7 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
CFAP43Q8NDM7 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC27.62■■■□□ 2.01
CFAP43Q8NDM7 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC27.62■■■□□ 2.01
CFAP43Q8NDM7 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
CFAP43Q8NDM7 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC27.62■■■□□ 2.01
CFAP43Q8NDM7 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC27.62■■■□□ 2.01
CFAP43Q8NDM7 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
CFAP43Q8NDM7 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
CFAP43Q8NDM7 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
CFAP43Q8NDM7 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
CFAP43Q8NDM7 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC27.62■■■□□ 2.01
CFAP43Q8NDM7 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC27.62■■■□□ 2.01
CFAP43Q8NDM7 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC27.62■■■□□ 2.01
CFAP43Q8NDM7 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC27.62■■■□□ 2.01
CFAP43Q8NDM7 AC009949.1-201ENST00000623048 1830 ntBASIC27.62■■■□□ 2.01
CFAP43Q8NDM7 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC27.62■■■□□ 2.01
CFAP43Q8NDM7 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC27.62■■■□□ 2.01
CFAP43Q8NDM7 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC27.62■■■□□ 2.01
CFAP43Q8NDM7 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
CFAP43Q8NDM7 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
CFAP43Q8NDM7 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC27.61■■■□□ 2.01
CFAP43Q8NDM7 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
CFAP43Q8NDM7 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC27.61■■■□□ 2.01
CFAP43Q8NDM7 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC27.61■■■□□ 2.01
CFAP43Q8NDM7 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
CFAP43Q8NDM7 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
CFAP43Q8NDM7 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC27.61■■■□□ 2.01
CFAP43Q8NDM7 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC27.61■■■□□ 2.01
CFAP43Q8NDM7 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC27.61■■■□□ 2.01
CFAP43Q8NDM7 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC27.61■■■□□ 2.01
CFAP43Q8NDM7 METTL26-205ENST00000397666 726 ntTSL 2 BASIC27.61■■■□□ 2.01
CFAP43Q8NDM7 PRYP5-201ENST00000451909 266 ntBASIC27.61■■■□□ 2.01
CFAP43Q8NDM7 AC010654.1-201ENST00000615722 808 ntBASIC27.61■■■□□ 2.01
CFAP43Q8NDM7 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC27.61■■■□□ 2.01
CFAP43Q8NDM7 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC27.61■■■□□ 2.01
CFAP43Q8NDM7 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC27.61■■■□□ 2.01
CFAP43Q8NDM7 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC27.61■■■□□ 2.01
CFAP43Q8NDM7 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC27.61■■■□□ 2.01
CFAP43Q8NDM7 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC27.61■■■□□ 2.01
CFAP43Q8NDM7 AC090164.3-201ENST00000610780 2143 ntBASIC27.6■■■□□ 2.01
CFAP43Q8NDM7 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
CFAP43Q8NDM7 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC27.6■■■□□ 2.01
CFAP43Q8NDM7 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC27.6■■■□□ 2.01
CFAP43Q8NDM7 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC27.6■■■□□ 2.01
CFAP43Q8NDM7 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC27.6■■■□□ 2.01
CFAP43Q8NDM7 RIN3-211ENST00000557762 517 ntTSL 3 BASIC27.6■■■□□ 2.01
CFAP43Q8NDM7 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC27.6■■■□□ 2.01
CFAP43Q8NDM7 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC27.6■■■□□ 2.01
CFAP43Q8NDM7 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC27.6■■■□□ 2.01
CFAP43Q8NDM7 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC27.6■■■□□ 2.01
CFAP43Q8NDM7 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC27.6■■■□□ 2.01
CFAP43Q8NDM7 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC27.6■■■□□ 2.01
Retrieved 100 of 98,524 protein–RNA pairs in 64 ms