Protein–RNA interactions for Protein: Q8NC44

RETREG2, Reticulophagy regulator 2, humanhuman

Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG2Q8NC44 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC20.18■□□□□ 0.82
RETREG2Q8NC44 ESPNP-201ENST00000270691 2015 ntBASIC20.17■□□□□ 0.82
RETREG2Q8NC44 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RETREG2Q8NC44 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC20.17■□□□□ 0.82
RETREG2Q8NC44 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
RETREG2Q8NC44 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC20.17■□□□□ 0.82
RETREG2Q8NC44 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
RETREG2Q8NC44 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RETREG2Q8NC44 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
RETREG2Q8NC44 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC20.17■□□□□ 0.82
RETREG2Q8NC44 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC20.17■□□□□ 0.82
RETREG2Q8NC44 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC20.17■□□□□ 0.82
RETREG2Q8NC44 AC139530.3-201ENST00000620344 690 ntBASIC20.17■□□□□ 0.82
RETREG2Q8NC44 ANKRD20A8P-203ENST00000641373 517 ntBASIC20.17■□□□□ 0.82
RETREG2Q8NC44 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC20.17■□□□□ 0.82
RETREG2Q8NC44 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RETREG2Q8NC44 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC20.17■□□□□ 0.82
RETREG2Q8NC44 POR-209ENST00000439269 1858 ntTSL 2 BASIC20.17■□□□□ 0.82
RETREG2Q8NC44 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
RETREG2Q8NC44 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RETREG2Q8NC44 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
RETREG2Q8NC44 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RETREG2Q8NC44 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
RETREG2Q8NC44 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
RETREG2Q8NC44 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RETREG2Q8NC44 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
RETREG2Q8NC44 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC20.17■□□□□ 0.82
RETREG2Q8NC44 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
RETREG2Q8NC44 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RETREG2Q8NC44 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
RETREG2Q8NC44 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
RETREG2Q8NC44 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
RETREG2Q8NC44 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RETREG2Q8NC44 AP000997.3-201ENST00000623333 2250 ntBASIC20.16■□□□□ 0.82
RETREG2Q8NC44 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
RETREG2Q8NC44 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC20.16■□□□□ 0.82
RETREG2Q8NC44 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RETREG2Q8NC44 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RETREG2Q8NC44 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
RETREG2Q8NC44 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
RETREG2Q8NC44 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RETREG2Q8NC44 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC20.16■□□□□ 0.82
RETREG2Q8NC44 THAP5-204ENST00000438865 868 ntTSL 2 BASIC20.16■□□□□ 0.82
RETREG2Q8NC44 AC096582.2-201ENST00000510860 516 ntBASIC20.16■□□□□ 0.82
RETREG2Q8NC44 RNA5SP419-201ENST00000515908 135 ntBASIC20.16■□□□□ 0.82
RETREG2Q8NC44 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RETREG2Q8NC44 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC20.16■□□□□ 0.82
RETREG2Q8NC44 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC20.16■□□□□ 0.82
RETREG2Q8NC44 BNIP3P18-201ENST00000593976 575 ntBASIC20.16■□□□□ 0.82
RETREG2Q8NC44 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RETREG2Q8NC44 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RETREG2Q8NC44 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RETREG2Q8NC44 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RETREG2Q8NC44 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RETREG2Q8NC44 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
RETREG2Q8NC44 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RETREG2Q8NC44 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RETREG2Q8NC44 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC20.16■□□□□ 0.82
RETREG2Q8NC44 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
RETREG2Q8NC44 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC20.16■□□□□ 0.82
RETREG2Q8NC44 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
RETREG2Q8NC44 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RETREG2Q8NC44 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RETREG2Q8NC44 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
RETREG2Q8NC44 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RETREG2Q8NC44 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
RETREG2Q8NC44 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RETREG2Q8NC44 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RETREG2Q8NC44 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RETREG2Q8NC44 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RETREG2Q8NC44 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RETREG2Q8NC44 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RETREG2Q8NC44 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC20.15■□□□□ 0.82
RETREG2Q8NC44 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC20.15■□□□□ 0.82
RETREG2Q8NC44 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC20.15■□□□□ 0.82
RETREG2Q8NC44 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC20.15■□□□□ 0.82
RETREG2Q8NC44 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC20.15■□□□□ 0.82
RETREG2Q8NC44 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC20.15■□□□□ 0.82
RETREG2Q8NC44 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
RETREG2Q8NC44 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
RETREG2Q8NC44 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
RETREG2Q8NC44 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RETREG2Q8NC44 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RETREG2Q8NC44 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.82
RETREG2Q8NC44 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.82
RETREG2Q8NC44 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC20.14■□□□□ 0.82
RETREG2Q8NC44 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RETREG2Q8NC44 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
RETREG2Q8NC44 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
RETREG2Q8NC44 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC20.14■□□□□ 0.81
RETREG2Q8NC44 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
RETREG2Q8NC44 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC20.14■□□□□ 0.81
RETREG2Q8NC44 AC020916.1-201ENST00000587762 1774 ntBASIC20.14■□□□□ 0.81
RETREG2Q8NC44 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
RETREG2Q8NC44 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RETREG2Q8NC44 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RETREG2Q8NC44 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC20.14■□□□□ 0.81
RETREG2Q8NC44 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC20.14■□□□□ 0.81
RETREG2Q8NC44 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
RETREG2Q8NC44 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC20.14■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms