Protein–RNA interactions for Protein: Q8N9R6

CDRT4, CMT1A duplicated region transcript 4 protein, humanhuman

Predictions only

Length 151 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT4Q8N9R6 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDRT4Q8N9R6 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CDRT4Q8N9R6 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CDRT4Q8N9R6 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CDRT4Q8N9R6 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDRT4Q8N9R6 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CDRT4Q8N9R6 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDRT4Q8N9R6 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC16.57■□□□□ 0.24
CDRT4Q8N9R6 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC16.57■□□□□ 0.24
CDRT4Q8N9R6 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDRT4Q8N9R6 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC16.57■□□□□ 0.24
CDRT4Q8N9R6 KRT8P26-201ENST00000534154 1276 ntBASIC16.57■□□□□ 0.24
CDRT4Q8N9R6 AC090616.6-201ENST00000582640 721 ntBASIC16.57■□□□□ 0.24
CDRT4Q8N9R6 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC16.57■□□□□ 0.24
CDRT4Q8N9R6 VPS72-207ENST00000640458 689 ntTSL 5 BASIC16.57■□□□□ 0.24
CDRT4Q8N9R6 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC16.57■□□□□ 0.24
CDRT4Q8N9R6 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDRT4Q8N9R6 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
CDRT4Q8N9R6 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
CDRT4Q8N9R6 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDRT4Q8N9R6 PODN-203ENST00000395871 2744 ntTSL 5 BASIC16.57■□□□□ 0.24
CDRT4Q8N9R6 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
CDRT4Q8N9R6 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC16.57■□□□□ 0.24
CDRT4Q8N9R6 LETM1P2-201ENST00000597330 2178 ntBASIC16.57■□□□□ 0.24
CDRT4Q8N9R6 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDRT4Q8N9R6 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDRT4Q8N9R6 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CDRT4Q8N9R6 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDRT4Q8N9R6 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
CDRT4Q8N9R6 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CDRT4Q8N9R6 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDRT4Q8N9R6 AC026471.1-201ENST00000564629 3026 ntBASIC16.56■□□□□ 0.24
CDRT4Q8N9R6 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDRT4Q8N9R6 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
CDRT4Q8N9R6 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC16.56■□□□□ 0.24
CDRT4Q8N9R6 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC16.56■□□□□ 0.24
CDRT4Q8N9R6 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDRT4Q8N9R6 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDRT4Q8N9R6 AL355312.1-201ENST00000407115 2176 ntBASIC16.56■□□□□ 0.24
CDRT4Q8N9R6 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDRT4Q8N9R6 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDRT4Q8N9R6 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC16.56■□□□□ 0.24
CDRT4Q8N9R6 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDRT4Q8N9R6 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDRT4Q8N9R6 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC16.56■□□□□ 0.24
CDRT4Q8N9R6 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
CDRT4Q8N9R6 CD320-202ENST00000537716 1119 ntTSL 2 BASIC16.56■□□□□ 0.24
CDRT4Q8N9R6 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC16.56■□□□□ 0.24
CDRT4Q8N9R6 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CDRT4Q8N9R6 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CDRT4Q8N9R6 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC16.56■□□□□ 0.24
CDRT4Q8N9R6 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDRT4Q8N9R6 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDRT4Q8N9R6 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
CDRT4Q8N9R6 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDRT4Q8N9R6 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDRT4Q8N9R6 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC16.56■□□□□ 0.24
CDRT4Q8N9R6 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC16.56■□□□□ 0.24
CDRT4Q8N9R6 AC133963.1-201ENST00000504166 1679 ntBASIC16.56■□□□□ 0.24
CDRT4Q8N9R6 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDRT4Q8N9R6 BX276092.7-203ENST00000637198 1536 ntBASIC16.55■□□□□ 0.24
CDRT4Q8N9R6 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDRT4Q8N9R6 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC16.55■□□□□ 0.24
CDRT4Q8N9R6 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDRT4Q8N9R6 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDRT4Q8N9R6 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC16.55■□□□□ 0.24
CDRT4Q8N9R6 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CDRT4Q8N9R6 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC16.55■□□□□ 0.24
CDRT4Q8N9R6 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC16.55■□□□□ 0.24
CDRT4Q8N9R6 AC005332.1-201ENST00000577698 1310 ntBASIC16.55■□□□□ 0.24
CDRT4Q8N9R6 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDRT4Q8N9R6 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDRT4Q8N9R6 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDRT4Q8N9R6 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CDRT4Q8N9R6 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC16.55■□□□□ 0.24
CDRT4Q8N9R6 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC16.55■□□□□ 0.24
CDRT4Q8N9R6 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CDRT4Q8N9R6 FAM86EP-206ENST00000510506 987 ntBASIC16.55■□□□□ 0.24
CDRT4Q8N9R6 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC16.55■□□□□ 0.24
CDRT4Q8N9R6 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CDRT4Q8N9R6 AC087388.1-201ENST00000571370 1112 ntBASIC16.55■□□□□ 0.24
CDRT4Q8N9R6 LINC01451-201ENST00000623792 534 ntBASIC16.55■□□□□ 0.24
CDRT4Q8N9R6 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDRT4Q8N9R6 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDRT4Q8N9R6 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
CDRT4Q8N9R6 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDRT4Q8N9R6 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDRT4Q8N9R6 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
CDRT4Q8N9R6 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDRT4Q8N9R6 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDRT4Q8N9R6 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
CDRT4Q8N9R6 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
CDRT4Q8N9R6 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDRT4Q8N9R6 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDRT4Q8N9R6 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC16.54■□□□□ 0.24
CDRT4Q8N9R6 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CDRT4Q8N9R6 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC16.54■□□□□ 0.24
CDRT4Q8N9R6 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDRT4Q8N9R6 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDRT4Q8N9R6 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms