Protein–RNA interactions for Protein: Q8N7H5

PAF1, RNA polymerase II-associated factor 1 homolog, humanhuman

Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1Q8N7H5 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PAF1Q8N7H5 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
PAF1Q8N7H5 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC18.32■□□□□ 0.52
PAF1Q8N7H5 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PAF1Q8N7H5 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PAF1Q8N7H5 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
PAF1Q8N7H5 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
PAF1Q8N7H5 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
PAF1Q8N7H5 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PAF1Q8N7H5 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PAF1Q8N7H5 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PAF1Q8N7H5 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
PAF1Q8N7H5 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
PAF1Q8N7H5 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PAF1Q8N7H5 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PAF1Q8N7H5 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC18.31■□□□□ 0.52
PAF1Q8N7H5 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC18.31■□□□□ 0.52
PAF1Q8N7H5 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
PAF1Q8N7H5 KIRREL3-AS3-201ENST00000404882 831 ntBASIC18.31■□□□□ 0.52
PAF1Q8N7H5 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
PAF1Q8N7H5 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PAF1Q8N7H5 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC18.31■□□□□ 0.52
PAF1Q8N7H5 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
PAF1Q8N7H5 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC18.31■□□□□ 0.52
PAF1Q8N7H5 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
PAF1Q8N7H5 WDR6-223ENST00000627177 207 ntTSL 2 BASIC18.31■□□□□ 0.52
PAF1Q8N7H5 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PAF1Q8N7H5 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
PAF1Q8N7H5 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
PAF1Q8N7H5 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PAF1Q8N7H5 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
PAF1Q8N7H5 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PAF1Q8N7H5 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PAF1Q8N7H5 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PAF1Q8N7H5 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
PAF1Q8N7H5 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
PAF1Q8N7H5 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
PAF1Q8N7H5 KRT18P1-202ENST00000452408 1331 ntBASIC18.3■□□□□ 0.52
PAF1Q8N7H5 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PAF1Q8N7H5 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PAF1Q8N7H5 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
PAF1Q8N7H5 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
PAF1Q8N7H5 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
PAF1Q8N7H5 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PAF1Q8N7H5 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PAF1Q8N7H5 HES2-202ENST00000377836 507 ntTSL 2 BASIC18.3■□□□□ 0.52
PAF1Q8N7H5 COPS8-203ENST00000409334 794 ntTSL 5 BASIC18.3■□□□□ 0.52
PAF1Q8N7H5 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PAF1Q8N7H5 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PAF1Q8N7H5 TSSC2-201ENST00000450217 709 ntBASIC18.3■□□□□ 0.52
PAF1Q8N7H5 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PAF1Q8N7H5 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PAF1Q8N7H5 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PAF1Q8N7H5 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
PAF1Q8N7H5 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
PAF1Q8N7H5 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PAF1Q8N7H5 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PAF1Q8N7H5 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PAF1Q8N7H5 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PAF1Q8N7H5 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
PAF1Q8N7H5 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PAF1Q8N7H5 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PAF1Q8N7H5 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.3■□□□□ 0.52
PAF1Q8N7H5 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PAF1Q8N7H5 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
PAF1Q8N7H5 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PAF1Q8N7H5 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
PAF1Q8N7H5 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
PAF1Q8N7H5 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PAF1Q8N7H5 AC135776.1-201ENST00000319817 2481 ntBASIC18.29■□□□□ 0.52
PAF1Q8N7H5 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC18.29■□□□□ 0.52
PAF1Q8N7H5 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
PAF1Q8N7H5 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC18.29■□□□□ 0.52
PAF1Q8N7H5 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PAF1Q8N7H5 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PAF1Q8N7H5 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PAF1Q8N7H5 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC18.29■□□□□ 0.52
PAF1Q8N7H5 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PAF1Q8N7H5 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PAF1Q8N7H5 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PAF1Q8N7H5 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PAF1Q8N7H5 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
PAF1Q8N7H5 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
PAF1Q8N7H5 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
PAF1Q8N7H5 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC18.29■□□□□ 0.52
PAF1Q8N7H5 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC18.29■□□□□ 0.52
PAF1Q8N7H5 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC18.29■□□□□ 0.52
PAF1Q8N7H5 AL390719.2-201ENST00000606993 987 ntBASIC18.29■□□□□ 0.52
PAF1Q8N7H5 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
PAF1Q8N7H5 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PAF1Q8N7H5 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PAF1Q8N7H5 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PAF1Q8N7H5 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
PAF1Q8N7H5 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC18.29■□□□□ 0.52
PAF1Q8N7H5 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
PAF1Q8N7H5 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PAF1Q8N7H5 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PAF1Q8N7H5 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
PAF1Q8N7H5 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
PAF1Q8N7H5 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms