Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SYNPOQ8N3V7 AD001527.2-201ENST00000622994 785 ntBASIC18.07■□□□□ 0.48
SYNPOQ8N3V7 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18.07■□□□□ 0.48
SYNPOQ8N3V7 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SYNPOQ8N3V7 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC18.07■□□□□ 0.48
SYNPOQ8N3V7 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC18.07■□□□□ 0.48
SYNPOQ8N3V7 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SYNPOQ8N3V7 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SYNPOQ8N3V7 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
SYNPOQ8N3V7 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC18.07■□□□□ 0.48
SYNPOQ8N3V7 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SYNPOQ8N3V7 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
SYNPOQ8N3V7 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SYNPOQ8N3V7 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SYNPOQ8N3V7 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC18.07■□□□□ 0.48
SYNPOQ8N3V7 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
SYNPOQ8N3V7 AL031598.1-201ENST00000561511 1773 ntBASIC18.07■□□□□ 0.48
SYNPOQ8N3V7 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC18.07■□□□□ 0.48
SYNPOQ8N3V7 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SYNPOQ8N3V7 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SYNPOQ8N3V7 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SYNPOQ8N3V7 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SYNPOQ8N3V7 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
SYNPOQ8N3V7 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
SYNPOQ8N3V7 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC18.06■□□□□ 0.48
SYNPOQ8N3V7 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SYNPOQ8N3V7 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
SYNPOQ8N3V7 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
SYNPOQ8N3V7 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
SYNPOQ8N3V7 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
SYNPOQ8N3V7 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC18.06■□□□□ 0.48
SYNPOQ8N3V7 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC18.06■□□□□ 0.48
SYNPOQ8N3V7 AC103564.2-201ENST00000432853 1299 ntBASIC18.06■□□□□ 0.48
SYNPOQ8N3V7 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC18.06■□□□□ 0.48
SYNPOQ8N3V7 BX005266.1-201ENST00000473402 457 ntBASIC18.06■□□□□ 0.48
SYNPOQ8N3V7 AC136632.2-201ENST00000512891 861 ntBASIC18.06■□□□□ 0.48
SYNPOQ8N3V7 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
SYNPOQ8N3V7 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC18.06■□□□□ 0.48
SYNPOQ8N3V7 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC18.06■□□□□ 0.48
SYNPOQ8N3V7 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
SYNPOQ8N3V7 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
SYNPOQ8N3V7 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SYNPOQ8N3V7 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SYNPOQ8N3V7 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SYNPOQ8N3V7 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SYNPOQ8N3V7 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
SYNPOQ8N3V7 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SYNPOQ8N3V7 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SYNPOQ8N3V7 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
SYNPOQ8N3V7 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SYNPOQ8N3V7 AC073621.1-201ENST00000392730 636 ntBASIC18.05■□□□□ 0.48
SYNPOQ8N3V7 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC18.05■□□□□ 0.48
SYNPOQ8N3V7 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC18.05■□□□□ 0.48
SYNPOQ8N3V7 AP006288.1-201ENST00000446065 395 ntBASIC18.05■□□□□ 0.48
SYNPOQ8N3V7 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC18.05■□□□□ 0.48
SYNPOQ8N3V7 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SYNPOQ8N3V7 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SYNPOQ8N3V7 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC18.05■□□□□ 0.48
SYNPOQ8N3V7 AC027796.2-201ENST00000575326 344 ntBASIC18.05■□□□□ 0.48
SYNPOQ8N3V7 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SYNPOQ8N3V7 AC064836.3-201ENST00000607928 673 ntBASIC18.05■□□□□ 0.48
SYNPOQ8N3V7 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SYNPOQ8N3V7 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.05■□□□□ 0.48
SYNPOQ8N3V7 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
SYNPOQ8N3V7 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.05■□□□□ 0.48
SYNPOQ8N3V7 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
SYNPOQ8N3V7 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
SYNPOQ8N3V7 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC18.05■□□□□ 0.48
SYNPOQ8N3V7 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC18.05■□□□□ 0.48
SYNPOQ8N3V7 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
SYNPOQ8N3V7 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
SYNPOQ8N3V7 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
SYNPOQ8N3V7 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
SYNPOQ8N3V7 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SYNPOQ8N3V7 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
SYNPOQ8N3V7 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC18.04■□□□□ 0.48
SYNPOQ8N3V7 AC211486.1-202ENST00000416371 468 ntBASIC18.04■□□□□ 0.48
SYNPOQ8N3V7 MCCD1P2-201ENST00000423228 335 ntBASIC18.04■□□□□ 0.48
SYNPOQ8N3V7 AC211476.1-201ENST00000503899 468 ntBASIC18.04■□□□□ 0.48
SYNPOQ8N3V7 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC18.04■□□□□ 0.48
SYNPOQ8N3V7 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC18.04■□□□□ 0.48
SYNPOQ8N3V7 COPE-211ENST00000600932 1144 ntTSL 5 BASIC18.04■□□□□ 0.48
SYNPOQ8N3V7 AL589182.2-201ENST00000619332 1049 ntBASIC18.04■□□□□ 0.48
SYNPOQ8N3V7 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SYNPOQ8N3V7 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SYNPOQ8N3V7 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC18.04■□□□□ 0.48
SYNPOQ8N3V7 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
SYNPOQ8N3V7 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SYNPOQ8N3V7 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC18.04■□□□□ 0.48
SYNPOQ8N3V7 GMCL1P1-201ENST00000463439 1581 ntBASIC18.04■□□□□ 0.48
SYNPOQ8N3V7 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC18.04■□□□□ 0.48
SYNPOQ8N3V7 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SYNPOQ8N3V7 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC18.04■□□□□ 0.48
SYNPOQ8N3V7 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC18.04■□□□□ 0.48
SYNPOQ8N3V7 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SYNPOQ8N3V7 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SYNPOQ8N3V7 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SYNPOQ8N3V7 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC18.03■□□□□ 0.48
SYNPOQ8N3V7 USP49-202ENST00000373010 2446 ntTSL 5 BASIC18.03■□□□□ 0.48
SYNPOQ8N3V7 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 60.2 ms