Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC11.98□□□□□ -0.49
LINC01561Q8N1V8 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
LINC01561Q8N1V8 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC11.98□□□□□ -0.49
LINC01561Q8N1V8 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC11.98□□□□□ -0.49
LINC01561Q8N1V8 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC11.98□□□□□ -0.49
LINC01561Q8N1V8 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC11.98□□□□□ -0.49
LINC01561Q8N1V8 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
LINC01561Q8N1V8 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
LINC01561Q8N1V8 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC11.98□□□□□ -0.49
LINC01561Q8N1V8 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC11.98□□□□□ -0.49
LINC01561Q8N1V8 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
LINC01561Q8N1V8 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
LINC01561Q8N1V8 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
LINC01561Q8N1V8 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
LINC01561Q8N1V8 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC11.98□□□□□ -0.49
LINC01561Q8N1V8 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
LINC01561Q8N1V8 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC11.98□□□□□ -0.49
LINC01561Q8N1V8 KRT89P-201ENST00000620027 1478 ntBASIC11.98□□□□□ -0.49
LINC01561Q8N1V8 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
LINC01561Q8N1V8 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
LINC01561Q8N1V8 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
LINC01561Q8N1V8 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
LINC01561Q8N1V8 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC11.98□□□□□ -0.49
LINC01561Q8N1V8 AC007663.1-201ENST00000438948 1240 ntBASIC11.98□□□□□ -0.49
LINC01561Q8N1V8 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC11.98□□□□□ -0.49
LINC01561Q8N1V8 SEC1P-202ENST00000473944 940 ntBASIC11.98□□□□□ -0.49
LINC01561Q8N1V8 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC11.98□□□□□ -0.49
LINC01561Q8N1V8 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC11.98□□□□□ -0.49
LINC01561Q8N1V8 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
LINC01561Q8N1V8 C2orf69P3-201ENST00000565542 1120 ntBASIC11.98□□□□□ -0.49
LINC01561Q8N1V8 NEK4P2-201ENST00000580004 1012 ntBASIC11.98□□□□□ -0.49
LINC01561Q8N1V8 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC11.98□□□□□ -0.49
LINC01561Q8N1V8 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
LINC01561Q8N1V8 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC11.98□□□□□ -0.49
LINC01561Q8N1V8 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
LINC01561Q8N1V8 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
LINC01561Q8N1V8 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
LINC01561Q8N1V8 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
LINC01561Q8N1V8 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
LINC01561Q8N1V8 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
LINC01561Q8N1V8 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
LINC01561Q8N1V8 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
LINC01561Q8N1V8 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
LINC01561Q8N1V8 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC11.98□□□□□ -0.49
LINC01561Q8N1V8 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
LINC01561Q8N1V8 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
LINC01561Q8N1V8 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
LINC01561Q8N1V8 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC11.98□□□□□ -0.49
LINC01561Q8N1V8 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
LINC01561Q8N1V8 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
LINC01561Q8N1V8 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
LINC01561Q8N1V8 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC11.98□□□□□ -0.49
LINC01561Q8N1V8 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
LINC01561Q8N1V8 AC100803.2-201ENST00000562459 1963 ntBASIC11.98□□□□□ -0.49
LINC01561Q8N1V8 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC11.98□□□□□ -0.49
LINC01561Q8N1V8 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
LINC01561Q8N1V8 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
LINC01561Q8N1V8 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
LINC01561Q8N1V8 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
LINC01561Q8N1V8 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
LINC01561Q8N1V8 CROCCP2-202ENST00000412962 2773 ntBASIC11.97□□□□□ -0.49
LINC01561Q8N1V8 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
LINC01561Q8N1V8 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC11.97□□□□□ -0.49
LINC01561Q8N1V8 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
LINC01561Q8N1V8 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
LINC01561Q8N1V8 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC11.97□□□□□ -0.49
LINC01561Q8N1V8 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC11.97□□□□□ -0.49
LINC01561Q8N1V8 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC11.97□□□□□ -0.49
LINC01561Q8N1V8 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
LINC01561Q8N1V8 MED29-202ENST00000594368 1471 ntTSL 2 BASIC11.97□□□□□ -0.49
LINC01561Q8N1V8 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
LINC01561Q8N1V8 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
LINC01561Q8N1V8 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
LINC01561Q8N1V8 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC11.97□□□□□ -0.49
LINC01561Q8N1V8 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
LINC01561Q8N1V8 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
LINC01561Q8N1V8 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC11.97□□□□□ -0.49
LINC01561Q8N1V8 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
LINC01561Q8N1V8 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
LINC01561Q8N1V8 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
LINC01561Q8N1V8 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
LINC01561Q8N1V8 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC11.97□□□□□ -0.49
LINC01561Q8N1V8 FAM201B-201ENST00000458407 597 ntBASIC11.97□□□□□ -0.49
LINC01561Q8N1V8 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
LINC01561Q8N1V8 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
LINC01561Q8N1V8 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
LINC01561Q8N1V8 PENK-204ENST00000518770 863 ntTSL 2 BASIC11.97□□□□□ -0.49
LINC01561Q8N1V8 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC11.97□□□□□ -0.49
LINC01561Q8N1V8 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
LINC01561Q8N1V8 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
LINC01561Q8N1V8 FITM1-202ENST00000559294 800 ntBASIC11.97□□□□□ -0.49
LINC01561Q8N1V8 MIR3917-201ENST00000580971 93 ntBASIC11.97□□□□□ -0.49
LINC01561Q8N1V8 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
LINC01561Q8N1V8 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
LINC01561Q8N1V8 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC11.97□□□□□ -0.49
LINC01561Q8N1V8 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC11.97□□□□□ -0.49
LINC01561Q8N1V8 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
LINC01561Q8N1V8 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
LINC01561Q8N1V8 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC11.97□□□□□ -0.49
LINC01561Q8N1V8 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms