Protein–RNA interactions for Protein: Q8IY18

SMC5, Structural maintenance of chromosomes protein 5, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5Q8IY18 RN7SL606P-201ENST00000472779 293 ntBASIC22.02■■□□□ 1.12
SMC5Q8IY18 DUX4L26-201ENST00000489078 1255 ntBASIC22.02■■□□□ 1.12
SMC5Q8IY18 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC22.02■■□□□ 1.12
SMC5Q8IY18 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC22.02■■□□□ 1.12
SMC5Q8IY18 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC22.02■■□□□ 1.12
SMC5Q8IY18 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC22.02■■□□□ 1.12
SMC5Q8IY18 RN7SL850P-201ENST00000579959 291 ntBASIC22.02■■□□□ 1.12
SMC5Q8IY18 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
SMC5Q8IY18 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.12
SMC5Q8IY18 AC010460.3-201ENST00000511359 1579 ntBASIC22.02■■□□□ 1.12
SMC5Q8IY18 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC22.02■■□□□ 1.12
SMC5Q8IY18 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC22.02■■□□□ 1.12
SMC5Q8IY18 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
SMC5Q8IY18 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC22.02■■□□□ 1.12
SMC5Q8IY18 UBC-206ENST00000538617 1303 ntTSL 5 BASIC22.02■■□□□ 1.12
SMC5Q8IY18 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
SMC5Q8IY18 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC22.02■■□□□ 1.12
SMC5Q8IY18 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
SMC5Q8IY18 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.11
SMC5Q8IY18 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
SMC5Q8IY18 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
SMC5Q8IY18 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC22.01■■□□□ 1.11
SMC5Q8IY18 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC22.01■■□□□ 1.11
SMC5Q8IY18 AC022211.2-201ENST00000585075 2527 ntBASIC22.01■■□□□ 1.11
SMC5Q8IY18 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
SMC5Q8IY18 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
SMC5Q8IY18 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC22.01■■□□□ 1.11
SMC5Q8IY18 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
SMC5Q8IY18 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
SMC5Q8IY18 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
SMC5Q8IY18 PCDHA12-202ENST00000613593 2588 ntBASIC22.01■■□□□ 1.11
SMC5Q8IY18 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
SMC5Q8IY18 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
SMC5Q8IY18 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
SMC5Q8IY18 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC22.01■■□□□ 1.11
SMC5Q8IY18 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
SMC5Q8IY18 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
SMC5Q8IY18 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
SMC5Q8IY18 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
SMC5Q8IY18 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
SMC5Q8IY18 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
SMC5Q8IY18 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
SMC5Q8IY18 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
SMC5Q8IY18 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC22■■□□□ 1.11
SMC5Q8IY18 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
SMC5Q8IY18 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC22■■□□□ 1.11
SMC5Q8IY18 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
SMC5Q8IY18 GUK1-204ENST00000366721 689 ntTSL 3 BASIC22■■□□□ 1.11
SMC5Q8IY18 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
SMC5Q8IY18 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC22■■□□□ 1.11
SMC5Q8IY18 AL671277.2-201ENST00000458060 996 ntBASIC22■■□□□ 1.11
SMC5Q8IY18 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC22■■□□□ 1.11
SMC5Q8IY18 AC009053.2-201ENST00000563701 2365 ntBASIC22■■□□□ 1.11
SMC5Q8IY18 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
SMC5Q8IY18 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
SMC5Q8IY18 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC22■■□□□ 1.11
SMC5Q8IY18 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC22■■□□□ 1.11
SMC5Q8IY18 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
SMC5Q8IY18 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC22■■□□□ 1.11
SMC5Q8IY18 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
SMC5Q8IY18 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC22■■□□□ 1.11
SMC5Q8IY18 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
SMC5Q8IY18 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
SMC5Q8IY18 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SMC5Q8IY18 ADM-208ENST00000534464 1640 ntTSL 2 BASIC21.99■■□□□ 1.11
SMC5Q8IY18 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
SMC5Q8IY18 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SMC5Q8IY18 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
SMC5Q8IY18 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC21.99■■□□□ 1.11
SMC5Q8IY18 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC21.99■■□□□ 1.11
SMC5Q8IY18 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
SMC5Q8IY18 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
SMC5Q8IY18 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
SMC5Q8IY18 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
SMC5Q8IY18 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC21.99■■□□□ 1.11
SMC5Q8IY18 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SMC5Q8IY18 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SMC5Q8IY18 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC21.99■■□□□ 1.11
SMC5Q8IY18 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC21.99■■□□□ 1.11
SMC5Q8IY18 CLN6-204ENST00000564752 900 ntTSL 3 BASIC21.99■■□□□ 1.11
SMC5Q8IY18 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC21.99■■□□□ 1.11
SMC5Q8IY18 CLN6-214ENST00000636314 442 ntTSL 3 BASIC21.99■■□□□ 1.11
SMC5Q8IY18 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SMC5Q8IY18 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
SMC5Q8IY18 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC21.99■■□□□ 1.11
SMC5Q8IY18 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SMC5Q8IY18 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SMC5Q8IY18 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
SMC5Q8IY18 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SMC5Q8IY18 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC21.98■■□□□ 1.11
SMC5Q8IY18 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC21.98■■□□□ 1.11
SMC5Q8IY18 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SMC5Q8IY18 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SMC5Q8IY18 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
SMC5Q8IY18 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SMC5Q8IY18 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
SMC5Q8IY18 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
SMC5Q8IY18 COX5BP2-201ENST00000392354 334 ntBASIC21.98■■□□□ 1.11
SMC5Q8IY18 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC21.98■■□□□ 1.11
SMC5Q8IY18 AL845331.1-201ENST00000424978 1190 ntBASIC21.98■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms