Protein–RNA interactions for Protein: Q8IWN7

RP1L1, Retinitis pigmentosa 1-like 1 protein, humanhuman

Predicted RBP Predictions only

Length 2,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RP1L1Q8IWN7 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
RP1L1Q8IWN7 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RP1L1Q8IWN7 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RP1L1Q8IWN7 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC16.11■□□□□ 0.17
RP1L1Q8IWN7 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RP1L1Q8IWN7 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC16.11■□□□□ 0.17
RP1L1Q8IWN7 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC16.11■□□□□ 0.17
RP1L1Q8IWN7 AC011467.2-201ENST00000598425 242 ntBASIC16.11■□□□□ 0.17
RP1L1Q8IWN7 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RP1L1Q8IWN7 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RP1L1Q8IWN7 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
RP1L1Q8IWN7 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RP1L1Q8IWN7 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RP1L1Q8IWN7 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
RP1L1Q8IWN7 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
RP1L1Q8IWN7 SIGLEC16-201ENST00000599858 1437 ntBASIC16.11■□□□□ 0.17
RP1L1Q8IWN7 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RP1L1Q8IWN7 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC16.11■□□□□ 0.17
RP1L1Q8IWN7 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RP1L1Q8IWN7 KRT18P27-201ENST00000427733 1299 ntBASIC16.11■□□□□ 0.17
RP1L1Q8IWN7 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC16.11■□□□□ 0.17
RP1L1Q8IWN7 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC16.11■□□□□ 0.17
RP1L1Q8IWN7 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC16.11■□□□□ 0.17
RP1L1Q8IWN7 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC16.11■□□□□ 0.17
RP1L1Q8IWN7 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC16.11■□□□□ 0.17
RP1L1Q8IWN7 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC16.11■□□□□ 0.17
RP1L1Q8IWN7 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC16.11■□□□□ 0.17
RP1L1Q8IWN7 AC006557.2-201ENST00000592985 1240 ntBASIC16.11■□□□□ 0.17
RP1L1Q8IWN7 AJ011932.1-201ENST00000621707 465 ntBASIC16.11■□□□□ 0.17
RP1L1Q8IWN7 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RP1L1Q8IWN7 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RP1L1Q8IWN7 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC16.11■□□□□ 0.17
RP1L1Q8IWN7 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC16.11■□□□□ 0.17
RP1L1Q8IWN7 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
RP1L1Q8IWN7 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RP1L1Q8IWN7 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC16.11■□□□□ 0.17
RP1L1Q8IWN7 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RP1L1Q8IWN7 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
RP1L1Q8IWN7 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RP1L1Q8IWN7 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RP1L1Q8IWN7 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
RP1L1Q8IWN7 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RP1L1Q8IWN7 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
RP1L1Q8IWN7 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RP1L1Q8IWN7 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
RP1L1Q8IWN7 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
RP1L1Q8IWN7 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RP1L1Q8IWN7 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC16.1■□□□□ 0.17
RP1L1Q8IWN7 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC16.1■□□□□ 0.17
RP1L1Q8IWN7 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RP1L1Q8IWN7 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RP1L1Q8IWN7 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RP1L1Q8IWN7 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RP1L1Q8IWN7 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC16.1■□□□□ 0.17
RP1L1Q8IWN7 AL096865.1-201ENST00000606796 927 ntBASIC16.1■□□□□ 0.17
RP1L1Q8IWN7 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC16.1■□□□□ 0.17
RP1L1Q8IWN7 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
RP1L1Q8IWN7 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC16.1■□□□□ 0.17
RP1L1Q8IWN7 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RP1L1Q8IWN7 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC16.1■□□□□ 0.17
RP1L1Q8IWN7 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RP1L1Q8IWN7 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC16.1■□□□□ 0.17
RP1L1Q8IWN7 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC16.1■□□□□ 0.17
RP1L1Q8IWN7 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RP1L1Q8IWN7 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
RP1L1Q8IWN7 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RP1L1Q8IWN7 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RP1L1Q8IWN7 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC16.1■□□□□ 0.17
RP1L1Q8IWN7 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC16.1■□□□□ 0.17
RP1L1Q8IWN7 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC16.1■□□□□ 0.17
RP1L1Q8IWN7 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
RP1L1Q8IWN7 AC005829.1-201ENST00000570002 483 ntBASIC16.1■□□□□ 0.17
RP1L1Q8IWN7 C20orf181-201ENST00000623918 480 ntBASIC16.1■□□□□ 0.17
RP1L1Q8IWN7 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
RP1L1Q8IWN7 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
RP1L1Q8IWN7 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RP1L1Q8IWN7 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RP1L1Q8IWN7 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RP1L1Q8IWN7 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC16.1■□□□□ 0.17
RP1L1Q8IWN7 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RP1L1Q8IWN7 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RP1L1Q8IWN7 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
RP1L1Q8IWN7 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
RP1L1Q8IWN7 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC16.09■□□□□ 0.17
RP1L1Q8IWN7 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC16.09■□□□□ 0.17
RP1L1Q8IWN7 MTDHP4-201ENST00000600287 670 ntBASIC16.09■□□□□ 0.17
RP1L1Q8IWN7 AC073130.3-201ENST00000624389 2278 ntBASIC16.09■□□□□ 0.17
RP1L1Q8IWN7 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RP1L1Q8IWN7 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RP1L1Q8IWN7 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
RP1L1Q8IWN7 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
RP1L1Q8IWN7 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RP1L1Q8IWN7 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC16.09■□□□□ 0.17
RP1L1Q8IWN7 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC16.09■□□□□ 0.17
RP1L1Q8IWN7 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC16.09■□□□□ 0.17
RP1L1Q8IWN7 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
RP1L1Q8IWN7 MED29-202ENST00000594368 1471 ntTSL 2 BASIC16.09■□□□□ 0.17
RP1L1Q8IWN7 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC16.09■□□□□ 0.17
RP1L1Q8IWN7 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RP1L1Q8IWN7 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 73.3 ms