Protein–RNA interactions for Protein: Q86V81

ALYREF, THO complex subunit 4, humanhuman

Known RBP Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALYREFQ86V81 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC18.68■□□□□ 0.58
ALYREFQ86V81 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ALYREFQ86V81 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC18.68■□□□□ 0.58
ALYREFQ86V81 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
ALYREFQ86V81 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
ALYREFQ86V81 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ALYREFQ86V81 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ALYREFQ86V81 UBQLN4P1-201ENST00000461599 1801 ntBASIC18.67■□□□□ 0.58
ALYREFQ86V81 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
ALYREFQ86V81 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ALYREFQ86V81 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
ALYREFQ86V81 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
ALYREFQ86V81 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ALYREFQ86V81 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ALYREFQ86V81 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ALYREFQ86V81 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ALYREFQ86V81 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ALYREFQ86V81 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ALYREFQ86V81 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC18.67■□□□□ 0.58
ALYREFQ86V81 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC18.67■□□□□ 0.58
ALYREFQ86V81 RNA5SP416-201ENST00000516838 111 ntBASIC18.67■□□□□ 0.58
ALYREFQ86V81 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC18.67■□□□□ 0.58
ALYREFQ86V81 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC18.67■□□□□ 0.58
ALYREFQ86V81 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC18.67■□□□□ 0.58
ALYREFQ86V81 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ALYREFQ86V81 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
ALYREFQ86V81 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ALYREFQ86V81 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ALYREFQ86V81 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
ALYREFQ86V81 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC18.67■□□□□ 0.58
ALYREFQ86V81 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC18.67■□□□□ 0.58
ALYREFQ86V81 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ALYREFQ86V81 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC18.67■□□□□ 0.58
ALYREFQ86V81 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
ALYREFQ86V81 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ALYREFQ86V81 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ALYREFQ86V81 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
ALYREFQ86V81 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ALYREFQ86V81 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC18.66■□□□□ 0.58
ALYREFQ86V81 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC18.66■□□□□ 0.58
ALYREFQ86V81 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ALYREFQ86V81 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
ALYREFQ86V81 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
ALYREFQ86V81 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ALYREFQ86V81 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ALYREFQ86V81 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ALYREFQ86V81 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ALYREFQ86V81 METTL26-204ENST00000397665 558 ntTSL 2 BASIC18.66■□□□□ 0.58
ALYREFQ86V81 AC023274.1-201ENST00000418278 595 ntBASIC18.66■□□□□ 0.58
ALYREFQ86V81 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC18.66■□□□□ 0.58
ALYREFQ86V81 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC18.66■□□□□ 0.58
ALYREFQ86V81 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC18.66■□□□□ 0.58
ALYREFQ86V81 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC18.66■□□□□ 0.58
ALYREFQ86V81 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ALYREFQ86V81 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC18.66■□□□□ 0.58
ALYREFQ86V81 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
ALYREFQ86V81 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
ALYREFQ86V81 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ALYREFQ86V81 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ALYREFQ86V81 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ALYREFQ86V81 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ALYREFQ86V81 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ALYREFQ86V81 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC18.65■□□□□ 0.58
ALYREFQ86V81 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ALYREFQ86V81 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC18.65■□□□□ 0.58
ALYREFQ86V81 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC18.65■□□□□ 0.58
ALYREFQ86V81 MINOS1P3-201ENST00000457048 203 ntBASIC18.65■□□□□ 0.58
ALYREFQ86V81 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
ALYREFQ86V81 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC18.65■□□□□ 0.58
ALYREFQ86V81 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC18.65■□□□□ 0.58
ALYREFQ86V81 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC18.65■□□□□ 0.58
ALYREFQ86V81 AC005332.3-201ENST00000589904 676 ntBASIC18.65■□□□□ 0.58
ALYREFQ86V81 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ALYREFQ86V81 AL157888.1-201ENST00000631930 593 ntBASIC18.65■□□□□ 0.58
ALYREFQ86V81 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
ALYREFQ86V81 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC18.65■□□□□ 0.58
ALYREFQ86V81 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.65■□□□□ 0.58
ALYREFQ86V81 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
ALYREFQ86V81 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
ALYREFQ86V81 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ALYREFQ86V81 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ALYREFQ86V81 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
ALYREFQ86V81 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
ALYREFQ86V81 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
ALYREFQ86V81 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC18.65■□□□□ 0.58
ALYREFQ86V81 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ALYREFQ86V81 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC18.65■□□□□ 0.58
ALYREFQ86V81 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ALYREFQ86V81 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ALYREFQ86V81 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
ALYREFQ86V81 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
ALYREFQ86V81 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
ALYREFQ86V81 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
ALYREFQ86V81 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC18.64■□□□□ 0.58
ALYREFQ86V81 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
ALYREFQ86V81 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC18.64■□□□□ 0.57
ALYREFQ86V81 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ALYREFQ86V81 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ALYREFQ86V81 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
ALYREFQ86V81 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms