Protein–RNA interactions for Protein: Q7Z5J4

RAI1, Retinoic acid-induced protein 1, humanhuman

Predicted RBP Predictions only

Length 1,906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI1Q7Z5J4 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC15.14■□□□□ 0.01
RAI1Q7Z5J4 SRP19-202ENST00000445150 833 ntTSL 2 BASIC15.14■□□□□ 0.01
RAI1Q7Z5J4 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
RAI1Q7Z5J4 AC108751.1-201ENST00000490852 363 ntBASIC15.14■□□□□ 0.01
RAI1Q7Z5J4 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
RAI1Q7Z5J4 AC002347.1-201ENST00000569543 541 ntBASIC15.14■□□□□ 0.01
RAI1Q7Z5J4 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC15.14■□□□□ 0.01
RAI1Q7Z5J4 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
RAI1Q7Z5J4 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC15.14■□□□□ 0.01
RAI1Q7Z5J4 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RAI1Q7Z5J4 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
RAI1Q7Z5J4 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RAI1Q7Z5J4 AC002310.6-201ENST00000624451 1377 ntBASIC15.14■□□□□ 0.01
RAI1Q7Z5J4 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RAI1Q7Z5J4 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC15.14■□□□□ 0.01
RAI1Q7Z5J4 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC15.14■□□□□ 0.01
RAI1Q7Z5J4 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC15.14■□□□□ 0.01
RAI1Q7Z5J4 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RAI1Q7Z5J4 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
RAI1Q7Z5J4 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC15.14■□□□□ 0.01
RAI1Q7Z5J4 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RAI1Q7Z5J4 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC15.14■□□□□ 0.01
RAI1Q7Z5J4 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
RAI1Q7Z5J4 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
RAI1Q7Z5J4 DNAJB3-202ENST00000449667 1266 ntBASIC15.13■□□□□ 0.01
RAI1Q7Z5J4 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC15.13■□□□□ 0.01
RAI1Q7Z5J4 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
RAI1Q7Z5J4 RNA5SP416-201ENST00000516838 111 ntBASIC15.13■□□□□ 0.01
RAI1Q7Z5J4 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC15.13■□□□□ 0.01
RAI1Q7Z5J4 AC006557.2-201ENST00000592985 1240 ntBASIC15.13■□□□□ 0.01
RAI1Q7Z5J4 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC15.13■□□□□ 0.01
RAI1Q7Z5J4 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RAI1Q7Z5J4 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
RAI1Q7Z5J4 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RAI1Q7Z5J4 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC15.13■□□□□ 0.01
RAI1Q7Z5J4 ADM-208ENST00000534464 1640 ntTSL 2 BASIC15.13■□□□□ 0.01
RAI1Q7Z5J4 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
RAI1Q7Z5J4 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
RAI1Q7Z5J4 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RAI1Q7Z5J4 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC15.13■□□□□ 0.01
RAI1Q7Z5J4 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
RAI1Q7Z5J4 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RAI1Q7Z5J4 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC15.13■□□□□ 0.01
RAI1Q7Z5J4 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
RAI1Q7Z5J4 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
RAI1Q7Z5J4 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RAI1Q7Z5J4 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RAI1Q7Z5J4 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC15.13■□□□□ 0.01
RAI1Q7Z5J4 REXO1L9P-201ENST00000604264 2108 ntBASIC15.13■□□□□ 0.01
RAI1Q7Z5J4 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
RAI1Q7Z5J4 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RAI1Q7Z5J4 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RAI1Q7Z5J4 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RAI1Q7Z5J4 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
RAI1Q7Z5J4 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RAI1Q7Z5J4 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RAI1Q7Z5J4 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RAI1Q7Z5J4 PMP22-202ENST00000395936 816 ntTSL 3 BASIC15.13■□□□□ 0.01
RAI1Q7Z5J4 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC15.13■□□□□ 0.01
RAI1Q7Z5J4 URGCP-206ENST00000446958 365 ntTSL 2 BASIC15.13■□□□□ 0.01
RAI1Q7Z5J4 AP001160.2-201ENST00000596071 487 ntBASIC15.13■□□□□ 0.01
RAI1Q7Z5J4 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
RAI1Q7Z5J4 AL353593.2-201ENST00000602529 1483 ntBASIC15.13■□□□□ 0.01
RAI1Q7Z5J4 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RAI1Q7Z5J4 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC15.13■□□□□ 0.01
RAI1Q7Z5J4 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC15.13■□□□□ 0.01
RAI1Q7Z5J4 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RAI1Q7Z5J4 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC15.12■□□□□ 0.01
RAI1Q7Z5J4 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RAI1Q7Z5J4 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC15.12■□□□□ 0.01
RAI1Q7Z5J4 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
RAI1Q7Z5J4 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RAI1Q7Z5J4 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
RAI1Q7Z5J4 ELK2BP-201ENST00000415014 1224 ntBASIC15.12■□□□□ 0.01
RAI1Q7Z5J4 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
RAI1Q7Z5J4 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RAI1Q7Z5J4 BX005266.1-201ENST00000473402 457 ntBASIC15.12■□□□□ 0.01
RAI1Q7Z5J4 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC15.12■□□□□ 0.01
RAI1Q7Z5J4 AC136632.2-201ENST00000512891 861 ntBASIC15.12■□□□□ 0.01
RAI1Q7Z5J4 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
RAI1Q7Z5J4 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC15.12■□□□□ 0.01
RAI1Q7Z5J4 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
RAI1Q7Z5J4 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RAI1Q7Z5J4 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
RAI1Q7Z5J4 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
RAI1Q7Z5J4 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC15.12■□□□□ 0.01
RAI1Q7Z5J4 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC15.12■□□□□ 0.01
RAI1Q7Z5J4 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
RAI1Q7Z5J4 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RAI1Q7Z5J4 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RAI1Q7Z5J4 BEX3-201ENST00000361298 921 ntTSL 2 BASIC15.11■□□□□ 0.01
RAI1Q7Z5J4 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC15.11■□□□□ 0.01
RAI1Q7Z5J4 FIS1-203ENST00000442303 631 ntTSL 3 BASIC15.11■□□□□ 0.01
RAI1Q7Z5J4 DNAJB3-201ENST00000446806 729 ntBASIC15.11■□□□□ 0.01
RAI1Q7Z5J4 TCAP-202ENST00000578283 583 ntTSL 5 BASIC15.11■□□□□ 0.01
RAI1Q7Z5J4 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
RAI1Q7Z5J4 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RAI1Q7Z5J4 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC15.11■□□□□ 0.01
RAI1Q7Z5J4 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RAI1Q7Z5J4 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 60.9 ms