Protein–RNA interactions for Protein: Q7LBR1

CHMP1B, Charged multivesicular body protein 1b, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1BQ7LBR1 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
CHMP1BQ7LBR1 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CHMP1BQ7LBR1 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CHMP1BQ7LBR1 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CHMP1BQ7LBR1 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
CHMP1BQ7LBR1 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC16.46■□□□□ 0.23
CHMP1BQ7LBR1 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CHMP1BQ7LBR1 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CHMP1BQ7LBR1 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CHMP1BQ7LBR1 ASL-204ENST00000395331 1538 ntTSL 5 BASIC16.46■□□□□ 0.23
CHMP1BQ7LBR1 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC16.46■□□□□ 0.23
CHMP1BQ7LBR1 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC16.46■□□□□ 0.23
CHMP1BQ7LBR1 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CHMP1BQ7LBR1 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CHMP1BQ7LBR1 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC16.46■□□□□ 0.23
CHMP1BQ7LBR1 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
CHMP1BQ7LBR1 SNCG-201ENST00000348795 684 ntTSL 2 BASIC16.46■□□□□ 0.23
CHMP1BQ7LBR1 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CHMP1BQ7LBR1 MIR662-201ENST00000384847 95 ntBASIC16.46■□□□□ 0.23
CHMP1BQ7LBR1 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CHMP1BQ7LBR1 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CHMP1BQ7LBR1 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC16.46■□□□□ 0.23
CHMP1BQ7LBR1 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
CHMP1BQ7LBR1 LITAF-220ENST00000620789 692 ntTSL 5 BASIC16.46■□□□□ 0.23
CHMP1BQ7LBR1 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CHMP1BQ7LBR1 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
CHMP1BQ7LBR1 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
CHMP1BQ7LBR1 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CHMP1BQ7LBR1 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CHMP1BQ7LBR1 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CHMP1BQ7LBR1 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
CHMP1BQ7LBR1 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
CHMP1BQ7LBR1 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC16.46■□□□□ 0.22
CHMP1BQ7LBR1 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
CHMP1BQ7LBR1 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
CHMP1BQ7LBR1 PRORSD1P-202ENST00000563365 2154 ntBASIC16.45■□□□□ 0.22
CHMP1BQ7LBR1 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CHMP1BQ7LBR1 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC16.45■□□□□ 0.22
CHMP1BQ7LBR1 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
CHMP1BQ7LBR1 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC16.45■□□□□ 0.22
CHMP1BQ7LBR1 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CHMP1BQ7LBR1 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CHMP1BQ7LBR1 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CHMP1BQ7LBR1 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CHMP1BQ7LBR1 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CHMP1BQ7LBR1 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CHMP1BQ7LBR1 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC16.45■□□□□ 0.22
CHMP1BQ7LBR1 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CHMP1BQ7LBR1 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CHMP1BQ7LBR1 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CHMP1BQ7LBR1 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CHMP1BQ7LBR1 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CHMP1BQ7LBR1 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CHMP1BQ7LBR1 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC16.45■□□□□ 0.22
CHMP1BQ7LBR1 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC16.45■□□□□ 0.22
CHMP1BQ7LBR1 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CHMP1BQ7LBR1 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC16.45■□□□□ 0.22
CHMP1BQ7LBR1 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC16.45■□□□□ 0.22
CHMP1BQ7LBR1 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
CHMP1BQ7LBR1 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CHMP1BQ7LBR1 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC16.45■□□□□ 0.22
CHMP1BQ7LBR1 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
CHMP1BQ7LBR1 AL139384.1-201ENST00000612143 3047 ntBASIC16.45■□□□□ 0.22
CHMP1BQ7LBR1 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
CHMP1BQ7LBR1 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CHMP1BQ7LBR1 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC16.45■□□□□ 0.22
CHMP1BQ7LBR1 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC16.45■□□□□ 0.22
CHMP1BQ7LBR1 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC16.45■□□□□ 0.22
CHMP1BQ7LBR1 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
CHMP1BQ7LBR1 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
CHMP1BQ7LBR1 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CHMP1BQ7LBR1 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CHMP1BQ7LBR1 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CHMP1BQ7LBR1 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC16.44■□□□□ 0.22
CHMP1BQ7LBR1 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CHMP1BQ7LBR1 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
CHMP1BQ7LBR1 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CHMP1BQ7LBR1 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CHMP1BQ7LBR1 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CHMP1BQ7LBR1 AC093525.10-201ENST00000625130 1569 ntBASIC16.44■□□□□ 0.22
CHMP1BQ7LBR1 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CHMP1BQ7LBR1 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CHMP1BQ7LBR1 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CHMP1BQ7LBR1 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC16.44■□□□□ 0.22
CHMP1BQ7LBR1 BAALC-202ENST00000306391 243 ntTSL 5 BASIC16.44■□□□□ 0.22
CHMP1BQ7LBR1 BAALC-204ENST00000330955 222 ntTSL 5 BASIC16.44■□□□□ 0.22
CHMP1BQ7LBR1 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CHMP1BQ7LBR1 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC16.44■□□□□ 0.22
CHMP1BQ7LBR1 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CHMP1BQ7LBR1 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CHMP1BQ7LBR1 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CHMP1BQ7LBR1 KRT8P26-201ENST00000534154 1276 ntBASIC16.44■□□□□ 0.22
CHMP1BQ7LBR1 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC16.44■□□□□ 0.22
CHMP1BQ7LBR1 METTL23-204ENST00000586752 904 ntTSL 2 BASIC16.44■□□□□ 0.22
CHMP1BQ7LBR1 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
CHMP1BQ7LBR1 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CHMP1BQ7LBR1 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
CHMP1BQ7LBR1 ANO7L1-203ENST00000602586 1720 ntBASIC16.44■□□□□ 0.22
CHMP1BQ7LBR1 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CHMP1BQ7LBR1 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms