Protein–RNA interactions for Protein: Q71U36

TUBA1A, Tubulin alpha-1A chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1AQ71U36 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC16.48■□□□□ 0.23
TUBA1AQ71U36 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
TUBA1AQ71U36 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC16.48■□□□□ 0.23
TUBA1AQ71U36 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
TUBA1AQ71U36 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TUBA1AQ71U36 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TUBA1AQ71U36 AC008556.1-201ENST00000610908 2040 ntBASIC16.48■□□□□ 0.23
TUBA1AQ71U36 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
TUBA1AQ71U36 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
TUBA1AQ71U36 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC16.48■□□□□ 0.23
TUBA1AQ71U36 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TUBA1AQ71U36 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TUBA1AQ71U36 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TUBA1AQ71U36 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TUBA1AQ71U36 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
TUBA1AQ71U36 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TUBA1AQ71U36 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TUBA1AQ71U36 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC16.47■□□□□ 0.23
TUBA1AQ71U36 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC16.47■□□□□ 0.23
TUBA1AQ71U36 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TUBA1AQ71U36 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TUBA1AQ71U36 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TUBA1AQ71U36 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TUBA1AQ71U36 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TUBA1AQ71U36 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TUBA1AQ71U36 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
TUBA1AQ71U36 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC16.47■□□□□ 0.23
TUBA1AQ71U36 KRT8P3-201ENST00000519669 1449 ntBASIC16.47■□□□□ 0.23
TUBA1AQ71U36 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TUBA1AQ71U36 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
TUBA1AQ71U36 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
TUBA1AQ71U36 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
TUBA1AQ71U36 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC16.47■□□□□ 0.23
TUBA1AQ71U36 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TUBA1AQ71U36 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
TUBA1AQ71U36 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC16.47■□□□□ 0.23
TUBA1AQ71U36 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TUBA1AQ71U36 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC16.47■□□□□ 0.23
TUBA1AQ71U36 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
TUBA1AQ71U36 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
TUBA1AQ71U36 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
TUBA1AQ71U36 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TUBA1AQ71U36 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC16.47■□□□□ 0.23
TUBA1AQ71U36 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
TUBA1AQ71U36 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC16.47■□□□□ 0.23
TUBA1AQ71U36 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
TUBA1AQ71U36 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
TUBA1AQ71U36 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TUBA1AQ71U36 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
TUBA1AQ71U36 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TUBA1AQ71U36 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
TUBA1AQ71U36 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
TUBA1AQ71U36 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC16.46■□□□□ 0.23
TUBA1AQ71U36 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TUBA1AQ71U36 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TUBA1AQ71U36 NME9-203ENST00000383180 2133 ntTSL 2 BASIC16.46■□□□□ 0.23
TUBA1AQ71U36 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TUBA1AQ71U36 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
TUBA1AQ71U36 RCC2P3-201ENST00000418112 1537 ntBASIC16.46■□□□□ 0.23
TUBA1AQ71U36 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TUBA1AQ71U36 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
TUBA1AQ71U36 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC16.46■□□□□ 0.23
TUBA1AQ71U36 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
TUBA1AQ71U36 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
TUBA1AQ71U36 AC113347.1-201ENST00000413321 391 ntBASIC16.46■□□□□ 0.23
TUBA1AQ71U36 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC16.46■□□□□ 0.23
TUBA1AQ71U36 AL137013.1-201ENST00000432946 1228 ntBASIC16.46■□□□□ 0.23
TUBA1AQ71U36 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC16.46■□□□□ 0.23
TUBA1AQ71U36 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
TUBA1AQ71U36 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TUBA1AQ71U36 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC16.46■□□□□ 0.23
TUBA1AQ71U36 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC16.46■□□□□ 0.23
TUBA1AQ71U36 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC16.46■□□□□ 0.23
TUBA1AQ71U36 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
TUBA1AQ71U36 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC16.46■□□□□ 0.23
TUBA1AQ71U36 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TUBA1AQ71U36 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
TUBA1AQ71U36 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
TUBA1AQ71U36 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
TUBA1AQ71U36 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TUBA1AQ71U36 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
TUBA1AQ71U36 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC16.46■□□□□ 0.22
TUBA1AQ71U36 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
TUBA1AQ71U36 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
TUBA1AQ71U36 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
TUBA1AQ71U36 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TUBA1AQ71U36 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC16.45■□□□□ 0.22
TUBA1AQ71U36 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TUBA1AQ71U36 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TUBA1AQ71U36 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
TUBA1AQ71U36 KRT8P45-201ENST00000414328 1447 ntBASIC16.45■□□□□ 0.22
TUBA1AQ71U36 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
TUBA1AQ71U36 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC16.45■□□□□ 0.22
TUBA1AQ71U36 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
TUBA1AQ71U36 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
TUBA1AQ71U36 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
TUBA1AQ71U36 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TUBA1AQ71U36 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC16.45■□□□□ 0.22
TUBA1AQ71U36 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
TUBA1AQ71U36 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms