Protein–RNA interactions for Protein: Q5VT40

FAM78B, Protein FAM78B, humanhuman

Predictions only

Length 261 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM78BQ5VT40 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
FAM78BQ5VT40 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
FAM78BQ5VT40 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
FAM78BQ5VT40 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
FAM78BQ5VT40 ELP6-205ENST00000439305 880 ntTSL 2 BASIC14.18□□□□□ -0.14
FAM78BQ5VT40 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC14.18□□□□□ -0.14
FAM78BQ5VT40 MCCD1P1-208ENST00000445732 328 ntBASIC14.18□□□□□ -0.14
FAM78BQ5VT40 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC14.18□□□□□ -0.14
FAM78BQ5VT40 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
FAM78BQ5VT40 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC14.18□□□□□ -0.14
FAM78BQ5VT40 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
FAM78BQ5VT40 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
FAM78BQ5VT40 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC14.18□□□□□ -0.14
FAM78BQ5VT40 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
FAM78BQ5VT40 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
FAM78BQ5VT40 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
FAM78BQ5VT40 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
FAM78BQ5VT40 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
FAM78BQ5VT40 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
FAM78BQ5VT40 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
FAM78BQ5VT40 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC14.18□□□□□ -0.14
FAM78BQ5VT40 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
FAM78BQ5VT40 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
FAM78BQ5VT40 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
FAM78BQ5VT40 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC14.18□□□□□ -0.14
FAM78BQ5VT40 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
FAM78BQ5VT40 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
FAM78BQ5VT40 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
FAM78BQ5VT40 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
FAM78BQ5VT40 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC14.17□□□□□ -0.14
FAM78BQ5VT40 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC14.17□□□□□ -0.14
FAM78BQ5VT40 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC14.17□□□□□ -0.14
FAM78BQ5VT40 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
FAM78BQ5VT40 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
FAM78BQ5VT40 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
FAM78BQ5VT40 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC14.17□□□□□ -0.14
FAM78BQ5VT40 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
FAM78BQ5VT40 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
FAM78BQ5VT40 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC14.17□□□□□ -0.14
FAM78BQ5VT40 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC14.17□□□□□ -0.14
FAM78BQ5VT40 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
FAM78BQ5VT40 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
FAM78BQ5VT40 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
FAM78BQ5VT40 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
FAM78BQ5VT40 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
FAM78BQ5VT40 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
FAM78BQ5VT40 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
FAM78BQ5VT40 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
FAM78BQ5VT40 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC14.17□□□□□ -0.14
FAM78BQ5VT40 PRORSD1P-201ENST00000295112 541 ntBASIC14.17□□□□□ -0.14
FAM78BQ5VT40 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
FAM78BQ5VT40 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
FAM78BQ5VT40 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
FAM78BQ5VT40 KSR1P1-201ENST00000446298 240 ntBASIC14.17□□□□□ -0.14
FAM78BQ5VT40 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC14.17□□□□□ -0.14
FAM78BQ5VT40 FAM207BP-201ENST00000447172 505 ntBASIC14.17□□□□□ -0.14
FAM78BQ5VT40 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC14.17□□□□□ -0.14
FAM78BQ5VT40 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC14.17□□□□□ -0.14
FAM78BQ5VT40 RPS2P4-201ENST00000476944 856 ntBASIC14.17□□□□□ -0.14
FAM78BQ5VT40 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
FAM78BQ5VT40 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC14.17□□□□□ -0.14
FAM78BQ5VT40 AL353708.3-201ENST00000610272 989 ntBASIC14.17□□□□□ -0.14
FAM78BQ5VT40 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
FAM78BQ5VT40 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
FAM78BQ5VT40 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
FAM78BQ5VT40 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
FAM78BQ5VT40 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
FAM78BQ5VT40 AC009102.3-201ENST00000623118 1491 ntBASIC14.17□□□□□ -0.14
FAM78BQ5VT40 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC14.17□□□□□ -0.14
FAM78BQ5VT40 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC14.17□□□□□ -0.14
FAM78BQ5VT40 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC14.17□□□□□ -0.14
FAM78BQ5VT40 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC14.17□□□□□ -0.14
FAM78BQ5VT40 SDHAP2-201ENST00000455183 2001 ntBASIC14.17□□□□□ -0.14
FAM78BQ5VT40 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
FAM78BQ5VT40 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
FAM78BQ5VT40 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
FAM78BQ5VT40 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
FAM78BQ5VT40 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
FAM78BQ5VT40 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
FAM78BQ5VT40 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
FAM78BQ5VT40 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
FAM78BQ5VT40 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
FAM78BQ5VT40 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
FAM78BQ5VT40 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
FAM78BQ5VT40 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
FAM78BQ5VT40 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
FAM78BQ5VT40 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC14.16□□□□□ -0.14
FAM78BQ5VT40 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
FAM78BQ5VT40 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
FAM78BQ5VT40 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
FAM78BQ5VT40 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
FAM78BQ5VT40 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
FAM78BQ5VT40 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC14.16□□□□□ -0.14
FAM78BQ5VT40 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
FAM78BQ5VT40 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
FAM78BQ5VT40 FDX2-207ENST00000494368 584 ntTSL 4 BASIC14.16□□□□□ -0.14
FAM78BQ5VT40 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC14.16□□□□□ -0.14
FAM78BQ5VT40 AC142381.4-202ENST00000563973 229 ntBASIC14.16□□□□□ -0.14
FAM78BQ5VT40 RARRES2P10-201ENST00000564312 460 ntBASIC14.16□□□□□ -0.14
FAM78BQ5VT40 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms