Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 NFYC-AS1-201ENST00000606277 1687 ntBASIC19.02■□□□□ 0.64
CTC1Q2NKJ3 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CTC1Q2NKJ3 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC19.02■□□□□ 0.64
CTC1Q2NKJ3 ASL-204ENST00000395331 1538 ntTSL 5 BASIC19.02■□□□□ 0.64
CTC1Q2NKJ3 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
CTC1Q2NKJ3 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
CTC1Q2NKJ3 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.02■□□□□ 0.64
CTC1Q2NKJ3 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CTC1Q2NKJ3 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CTC1Q2NKJ3 CTNS-203ENST00000399306 803 ntTSL 3 BASIC19.02■□□□□ 0.64
CTC1Q2NKJ3 AC023274.1-201ENST00000418278 595 ntBASIC19.02■□□□□ 0.64
CTC1Q2NKJ3 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC19.02■□□□□ 0.64
CTC1Q2NKJ3 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC19.02■□□□□ 0.64
CTC1Q2NKJ3 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CTC1Q2NKJ3 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC19.02■□□□□ 0.64
CTC1Q2NKJ3 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC19.02■□□□□ 0.64
CTC1Q2NKJ3 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CTC1Q2NKJ3 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CTC1Q2NKJ3 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CTC1Q2NKJ3 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CTC1Q2NKJ3 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CTC1Q2NKJ3 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CTC1Q2NKJ3 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CTC1Q2NKJ3 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
CTC1Q2NKJ3 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
CTC1Q2NKJ3 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC19.02■□□□□ 0.63
CTC1Q2NKJ3 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CTC1Q2NKJ3 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CTC1Q2NKJ3 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC19.01■□□□□ 0.63
CTC1Q2NKJ3 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CTC1Q2NKJ3 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CTC1Q2NKJ3 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
CTC1Q2NKJ3 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CTC1Q2NKJ3 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC19.01■□□□□ 0.63
CTC1Q2NKJ3 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CTC1Q2NKJ3 MTMR9LP-203ENST00000426597 1545 ntBASIC19.01■□□□□ 0.63
CTC1Q2NKJ3 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CTC1Q2NKJ3 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CTC1Q2NKJ3 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CTC1Q2NKJ3 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CTC1Q2NKJ3 BEX3-201ENST00000361298 921 ntTSL 2 BASIC19.01■□□□□ 0.63
CTC1Q2NKJ3 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CTC1Q2NKJ3 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC19.01■□□□□ 0.63
CTC1Q2NKJ3 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
CTC1Q2NKJ3 RFPL4AP1-201ENST00000530883 850 ntBASIC19.01■□□□□ 0.63
CTC1Q2NKJ3 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC19.01■□□□□ 0.63
CTC1Q2NKJ3 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC19.01■□□□□ 0.63
CTC1Q2NKJ3 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CTC1Q2NKJ3 RPS29-206ENST00000557111 488 ntTSL 2 BASIC19.01■□□□□ 0.63
CTC1Q2NKJ3 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC19.01■□□□□ 0.63
CTC1Q2NKJ3 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC19.01■□□□□ 0.63
CTC1Q2NKJ3 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
CTC1Q2NKJ3 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC19.01■□□□□ 0.63
CTC1Q2NKJ3 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC19.01■□□□□ 0.63
CTC1Q2NKJ3 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
CTC1Q2NKJ3 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CTC1Q2NKJ3 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC19.01■□□□□ 0.63
CTC1Q2NKJ3 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CTC1Q2NKJ3 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CTC1Q2NKJ3 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CTC1Q2NKJ3 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC19.01■□□□□ 0.63
CTC1Q2NKJ3 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CTC1Q2NKJ3 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CTC1Q2NKJ3 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CTC1Q2NKJ3 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC19■□□□□ 0.63
CTC1Q2NKJ3 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
CTC1Q2NKJ3 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC19■□□□□ 0.63
CTC1Q2NKJ3 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CTC1Q2NKJ3 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CTC1Q2NKJ3 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC19■□□□□ 0.63
CTC1Q2NKJ3 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC19■□□□□ 0.63
CTC1Q2NKJ3 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CTC1Q2NKJ3 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC19■□□□□ 0.63
CTC1Q2NKJ3 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CTC1Q2NKJ3 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
CTC1Q2NKJ3 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CTC1Q2NKJ3 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC19■□□□□ 0.63
CTC1Q2NKJ3 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
CTC1Q2NKJ3 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CTC1Q2NKJ3 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC19■□□□□ 0.63
CTC1Q2NKJ3 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CTC1Q2NKJ3 LAGE3P1-201ENST00000425356 484 ntBASIC19■□□□□ 0.63
CTC1Q2NKJ3 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC19■□□□□ 0.63
CTC1Q2NKJ3 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC19■□□□□ 0.63
CTC1Q2NKJ3 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC19■□□□□ 0.63
CTC1Q2NKJ3 CYMP-203ENST00000474680 1263 ntBASIC19■□□□□ 0.63
CTC1Q2NKJ3 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC19■□□□□ 0.63
CTC1Q2NKJ3 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CTC1Q2NKJ3 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC19■□□□□ 0.63
CTC1Q2NKJ3 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC19■□□□□ 0.63
CTC1Q2NKJ3 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
CTC1Q2NKJ3 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
CTC1Q2NKJ3 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CTC1Q2NKJ3 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC19■□□□□ 0.63
CTC1Q2NKJ3 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC19■□□□□ 0.63
CTC1Q2NKJ3 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
CTC1Q2NKJ3 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CTC1Q2NKJ3 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC19■□□□□ 0.63
CTC1Q2NKJ3 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CTC1Q2NKJ3 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms