Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC21.28■■□□□ 1
PDS5AQ29RF7 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC21.28■■□□□ 1
PDS5AQ29RF7 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC21.28■■□□□ 1
PDS5AQ29RF7 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PDS5AQ29RF7 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC21.28■■□□□ 1
PDS5AQ29RF7 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC21.28■■□□□ 1
PDS5AQ29RF7 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC21.28■■□□□ 1
PDS5AQ29RF7 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
PDS5AQ29RF7 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
PDS5AQ29RF7 AC092910.1-201ENST00000482027 1129 ntBASIC21.28■■□□□ 1
PDS5AQ29RF7 IGHV3-52-201ENST00000519770 353 ntBASIC21.28■■□□□ 1
PDS5AQ29RF7 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC21.28■■□□□ 1
PDS5AQ29RF7 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC21.28■■□□□ 1
PDS5AQ29RF7 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
PDS5AQ29RF7 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PDS5AQ29RF7 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC21.27■■□□□ 1
PDS5AQ29RF7 GID4-202ENST00000376345 1391 ntTSL 3 BASIC21.27■■□□□ 1
PDS5AQ29RF7 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
PDS5AQ29RF7 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
PDS5AQ29RF7 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
PDS5AQ29RF7 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PDS5AQ29RF7 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PDS5AQ29RF7 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC21.27■■□□□ 1
PDS5AQ29RF7 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC21.27■■□□□ 1
PDS5AQ29RF7 AP002414.3-201ENST00000589352 1468 ntBASIC21.27■■□□□ 1
PDS5AQ29RF7 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
PDS5AQ29RF7 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
PDS5AQ29RF7 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC21.27■■□□□ 1
PDS5AQ29RF7 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC21.27■□□□□ 0.99
PDS5AQ29RF7 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
PDS5AQ29RF7 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
PDS5AQ29RF7 LBH-204ENST00000406087 559 ntTSL 4 BASIC21.27■□□□□ 0.99
PDS5AQ29RF7 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC21.27■□□□□ 0.99
PDS5AQ29RF7 SIGLEC30P-201ENST00000455569 941 ntBASIC21.27■□□□□ 0.99
PDS5AQ29RF7 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC21.27■□□□□ 0.99
PDS5AQ29RF7 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC21.27■□□□□ 0.99
PDS5AQ29RF7 AC034105.1-201ENST00000563488 319 ntBASIC21.27■□□□□ 0.99
PDS5AQ29RF7 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC21.27■□□□□ 0.99
PDS5AQ29RF7 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC21.27■□□□□ 0.99
PDS5AQ29RF7 AC009336.1-201ENST00000608941 1553 ntBASIC21.27■□□□□ 0.99
PDS5AQ29RF7 Z83851.2-201ENST00000609564 659 ntBASIC21.27■□□□□ 0.99
PDS5AQ29RF7 AC004706.3-202ENST00000621574 984 ntBASIC21.27■□□□□ 0.99
PDS5AQ29RF7 AC117500.6-201ENST00000624871 588 ntBASIC21.27■□□□□ 0.99
PDS5AQ29RF7 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
PDS5AQ29RF7 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
PDS5AQ29RF7 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PDS5AQ29RF7 AC004817.3-201ENST00000602957 2129 ntBASIC21.26■□□□□ 0.99
PDS5AQ29RF7 ZNF259P1-201ENST00000407656 1365 ntBASIC21.26■□□□□ 0.99
PDS5AQ29RF7 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC21.26■□□□□ 0.99
PDS5AQ29RF7 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
PDS5AQ29RF7 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC21.26■□□□□ 0.99
PDS5AQ29RF7 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
PDS5AQ29RF7 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
PDS5AQ29RF7 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
PDS5AQ29RF7 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC21.26■□□□□ 0.99
PDS5AQ29RF7 NCF1C-201ENST00000438382 1427 ntBASIC21.26■□□□□ 0.99
PDS5AQ29RF7 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
PDS5AQ29RF7 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PDS5AQ29RF7 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
PDS5AQ29RF7 CENPM-204ENST00000402420 688 ntTSL 5 BASIC21.26■□□□□ 0.99
PDS5AQ29RF7 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC21.26■□□□□ 0.99
PDS5AQ29RF7 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC21.26■□□□□ 0.99
PDS5AQ29RF7 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
PDS5AQ29RF7 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC21.26■□□□□ 0.99
PDS5AQ29RF7 ARTN-206ENST00000472435 402 ntTSL 3 BASIC21.26■□□□□ 0.99
PDS5AQ29RF7 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC21.26■□□□□ 0.99
PDS5AQ29RF7 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC21.26■□□□□ 0.99
PDS5AQ29RF7 CYB561-217ENST00000582997 877 ntTSL 5 BASIC21.26■□□□□ 0.99
PDS5AQ29RF7 COPE-211ENST00000600932 1144 ntTSL 5 BASIC21.26■□□□□ 0.99
PDS5AQ29RF7 AL356488.2-201ENST00000602755 427 ntBASIC21.26■□□□□ 0.99
PDS5AQ29RF7 PGM5P2-202ENST00000637225 1043 ntBASIC21.26■□□□□ 0.99
PDS5AQ29RF7 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC21.26■□□□□ 0.99
PDS5AQ29RF7 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
PDS5AQ29RF7 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC21.26■□□□□ 0.99
PDS5AQ29RF7 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
PDS5AQ29RF7 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC21.25■□□□□ 0.99
PDS5AQ29RF7 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC21.25■□□□□ 0.99
PDS5AQ29RF7 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
PDS5AQ29RF7 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC21.25■□□□□ 0.99
PDS5AQ29RF7 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
PDS5AQ29RF7 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PDS5AQ29RF7 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PDS5AQ29RF7 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
PDS5AQ29RF7 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC21.25■□□□□ 0.99
PDS5AQ29RF7 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
PDS5AQ29RF7 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC21.25■□□□□ 0.99
PDS5AQ29RF7 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
PDS5AQ29RF7 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PDS5AQ29RF7 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC21.25■□□□□ 0.99
PDS5AQ29RF7 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC21.25■□□□□ 0.99
PDS5AQ29RF7 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC21.25■□□□□ 0.99
PDS5AQ29RF7 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
PDS5AQ29RF7 S100A2-206ENST00000497140 697 ntTSL 2 BASIC21.25■□□□□ 0.99
PDS5AQ29RF7 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
PDS5AQ29RF7 RNA5SP415-201ENST00000517246 115 ntBASIC21.25■□□□□ 0.99
PDS5AQ29RF7 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PDS5AQ29RF7 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PDS5AQ29RF7 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC21.25■□□□□ 0.99
PDS5AQ29RF7 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
PDS5AQ29RF7 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms