Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HIST1H1AQ02539 AC092338.2-201ENST00000568827 1415 ntBASIC13.68□□□□□ -0.22
HIST1H1AQ02539 AD000864.1-201ENST00000624076 2295 ntBASIC13.68□□□□□ -0.22
HIST1H1AQ02539 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
HIST1H1AQ02539 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC13.68□□□□□ -0.22
HIST1H1AQ02539 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
HIST1H1AQ02539 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC13.68□□□□□ -0.22
HIST1H1AQ02539 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC13.68□□□□□ -0.22
HIST1H1AQ02539 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC13.68□□□□□ -0.22
HIST1H1AQ02539 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC13.68□□□□□ -0.22
HIST1H1AQ02539 AC112497.1-201ENST00000624824 639 ntBASIC13.68□□□□□ -0.22
HIST1H1AQ02539 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC13.68□□□□□ -0.22
HIST1H1AQ02539 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
HIST1H1AQ02539 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC13.68□□□□□ -0.22
HIST1H1AQ02539 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
HIST1H1AQ02539 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HIST1H1AQ02539 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HIST1H1AQ02539 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HIST1H1AQ02539 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
HIST1H1AQ02539 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC13.68□□□□□ -0.22
HIST1H1AQ02539 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HIST1H1AQ02539 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
HIST1H1AQ02539 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC13.68□□□□□ -0.22
HIST1H1AQ02539 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC13.68□□□□□ -0.22
HIST1H1AQ02539 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
HIST1H1AQ02539 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC13.68□□□□□ -0.22
HIST1H1AQ02539 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC13.68□□□□□ -0.22
HIST1H1AQ02539 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HIST1H1AQ02539 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HIST1H1AQ02539 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
HIST1H1AQ02539 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
HIST1H1AQ02539 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HIST1H1AQ02539 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HIST1H1AQ02539 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC13.67□□□□□ -0.22
HIST1H1AQ02539 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
HIST1H1AQ02539 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HIST1H1AQ02539 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
HIST1H1AQ02539 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC13.67□□□□□ -0.22
HIST1H1AQ02539 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC13.67□□□□□ -0.22
HIST1H1AQ02539 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HIST1H1AQ02539 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HIST1H1AQ02539 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
HIST1H1AQ02539 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC13.67□□□□□ -0.22
HIST1H1AQ02539 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC13.67□□□□□ -0.22
HIST1H1AQ02539 AC007663.1-201ENST00000438948 1240 ntBASIC13.67□□□□□ -0.22
HIST1H1AQ02539 PHB2-202ENST00000440277 996 ntTSL 5 BASIC13.67□□□□□ -0.22
HIST1H1AQ02539 AC128688.1-201ENST00000487626 519 ntBASIC13.67□□□□□ -0.22
HIST1H1AQ02539 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
HIST1H1AQ02539 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC13.67□□□□□ -0.22
HIST1H1AQ02539 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC13.67□□□□□ -0.22
HIST1H1AQ02539 WWOX-216ENST00000569818 525 ntBASIC13.67□□□□□ -0.22
HIST1H1AQ02539 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC13.67□□□□□ -0.22
HIST1H1AQ02539 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
HIST1H1AQ02539 PHGDH-209ENST00000641074 1780 ntBASIC13.67□□□□□ -0.22
HIST1H1AQ02539 SDHAP2-201ENST00000455183 2001 ntBASIC13.67□□□□□ -0.22
HIST1H1AQ02539 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HIST1H1AQ02539 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
HIST1H1AQ02539 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HIST1H1AQ02539 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HIST1H1AQ02539 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HIST1H1AQ02539 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HIST1H1AQ02539 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
HIST1H1AQ02539 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
HIST1H1AQ02539 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HIST1H1AQ02539 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HIST1H1AQ02539 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
HIST1H1AQ02539 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
HIST1H1AQ02539 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
HIST1H1AQ02539 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
HIST1H1AQ02539 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
HIST1H1AQ02539 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
HIST1H1AQ02539 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC13.66□□□□□ -0.22
HIST1H1AQ02539 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
HIST1H1AQ02539 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
HIST1H1AQ02539 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
HIST1H1AQ02539 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
HIST1H1AQ02539 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
HIST1H1AQ02539 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
HIST1H1AQ02539 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
HIST1H1AQ02539 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
HIST1H1AQ02539 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
HIST1H1AQ02539 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
HIST1H1AQ02539 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
HIST1H1AQ02539 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
HIST1H1AQ02539 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
HIST1H1AQ02539 GXYLT1P6-201ENST00000456472 1187 ntBASIC13.66□□□□□ -0.22
HIST1H1AQ02539 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC13.66□□□□□ -0.22
HIST1H1AQ02539 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
HIST1H1AQ02539 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
HIST1H1AQ02539 SNX21-213ENST00000614929 587 ntTSL 5 BASIC13.66□□□□□ -0.22
HIST1H1AQ02539 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC13.66□□□□□ -0.22
HIST1H1AQ02539 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
HIST1H1AQ02539 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
HIST1H1AQ02539 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
HIST1H1AQ02539 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
HIST1H1AQ02539 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
HIST1H1AQ02539 STK4-201ENST00000372801 2038 ntTSL 2 BASIC13.66□□□□□ -0.22
HIST1H1AQ02539 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
HIST1H1AQ02539 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
HIST1H1AQ02539 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms