Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC15.71■□□□□ 0.11
NKX6-1P78426 AC073592.3-201ENST00000625118 1834 ntBASIC15.71■□□□□ 0.11
NKX6-1P78426 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NKX6-1P78426 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
NKX6-1P78426 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NKX6-1P78426 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
NKX6-1P78426 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC15.71■□□□□ 0.11
NKX6-1P78426 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC15.71■□□□□ 0.11
NKX6-1P78426 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
NKX6-1P78426 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC15.71■□□□□ 0.11
NKX6-1P78426 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC15.71■□□□□ 0.11
NKX6-1P78426 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
NKX6-1P78426 GPR32P1-201ENST00000601788 811 ntBASIC15.71■□□□□ 0.11
NKX6-1P78426 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
NKX6-1P78426 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC15.71■□□□□ 0.11
NKX6-1P78426 AF228730.7-201ENST00000641842 219 ntBASIC15.71■□□□□ 0.11
NKX6-1P78426 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC15.71■□□□□ 0.11
NKX6-1P78426 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC15.71■□□□□ 0.11
NKX6-1P78426 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
NKX6-1P78426 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
NKX6-1P78426 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
NKX6-1P78426 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC15.71■□□□□ 0.1
NKX6-1P78426 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC15.71■□□□□ 0.1
NKX6-1P78426 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC15.71■□□□□ 0.1
NKX6-1P78426 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
NKX6-1P78426 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC15.71■□□□□ 0.1
NKX6-1P78426 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.1
NKX6-1P78426 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
NKX6-1P78426 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
NKX6-1P78426 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
NKX6-1P78426 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
NKX6-1P78426 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NKX6-1P78426 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
NKX6-1P78426 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NKX6-1P78426 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
NKX6-1P78426 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NKX6-1P78426 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
NKX6-1P78426 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NKX6-1P78426 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
NKX6-1P78426 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC15.7■□□□□ 0.1
NKX6-1P78426 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NKX6-1P78426 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NKX6-1P78426 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC15.7■□□□□ 0.1
NKX6-1P78426 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
NKX6-1P78426 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
NKX6-1P78426 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
NKX6-1P78426 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NKX6-1P78426 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
NKX6-1P78426 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NKX6-1P78426 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NKX6-1P78426 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
NKX6-1P78426 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC15.7■□□□□ 0.1
NKX6-1P78426 AC113404.2-201ENST00000507884 177 ntBASIC15.7■□□□□ 0.1
NKX6-1P78426 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC15.7■□□□□ 0.1
NKX6-1P78426 PPOX-214ENST00000535223 664 ntTSL 3 BASIC15.7■□□□□ 0.1
NKX6-1P78426 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC15.7■□□□□ 0.1
NKX6-1P78426 AP001005.1-201ENST00000571755 1248 ntBASIC15.7■□□□□ 0.1
NKX6-1P78426 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC15.7■□□□□ 0.1
NKX6-1P78426 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC15.7■□□□□ 0.1
NKX6-1P78426 AL671883.3-201ENST00000603274 991 ntBASIC15.7■□□□□ 0.1
NKX6-1P78426 NME4-212ENST00000621774 904 ntTSL 3 BASIC15.7■□□□□ 0.1
NKX6-1P78426 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
NKX6-1P78426 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
NKX6-1P78426 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
NKX6-1P78426 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
NKX6-1P78426 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC15.7■□□□□ 0.1
NKX6-1P78426 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
NKX6-1P78426 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC15.7■□□□□ 0.1
NKX6-1P78426 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
NKX6-1P78426 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
NKX6-1P78426 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NKX6-1P78426 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NKX6-1P78426 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
NKX6-1P78426 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NKX6-1P78426 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
NKX6-1P78426 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC15.69■□□□□ 0.1
NKX6-1P78426 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NKX6-1P78426 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NKX6-1P78426 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NKX6-1P78426 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NKX6-1P78426 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
NKX6-1P78426 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC15.69■□□□□ 0.1
NKX6-1P78426 SAPCD2P3-201ENST00000455031 850 ntBASIC15.69■□□□□ 0.1
NKX6-1P78426 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC15.69■□□□□ 0.1
NKX6-1P78426 VENTXP7-201ENST00000475503 772 ntBASIC15.69■□□□□ 0.1
NKX6-1P78426 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC15.69■□□□□ 0.1
NKX6-1P78426 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC15.69■□□□□ 0.1
NKX6-1P78426 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
NKX6-1P78426 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC15.69■□□□□ 0.1
NKX6-1P78426 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC15.69■□□□□ 0.1
NKX6-1P78426 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC15.69■□□□□ 0.1
NKX6-1P78426 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC15.69■□□□□ 0.1
NKX6-1P78426 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
NKX6-1P78426 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
NKX6-1P78426 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
NKX6-1P78426 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
NKX6-1P78426 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NKX6-1P78426 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC15.69■□□□□ 0.1
NKX6-1P78426 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC15.69■□□□□ 0.1
NKX6-1P78426 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 66.8 ms