Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CDH4P55283 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC18.2■□□□□ 0.5
CDH4P55283 TPM4P1-201ENST00000436100 807 ntBASIC18.2■□□□□ 0.5
CDH4P55283 AC132008.2-207ENST00000454517 770 ntBASIC18.2■□□□□ 0.5
CDH4P55283 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC18.2■□□□□ 0.5
CDH4P55283 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC18.2■□□□□ 0.5
CDH4P55283 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC18.2■□□□□ 0.5
CDH4P55283 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CDH4P55283 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CDH4P55283 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CDH4P55283 REXO1L6P-202ENST00000619970 1078 ntBASIC18.2■□□□□ 0.5
CDH4P55283 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDH4P55283 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CDH4P55283 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC18.2■□□□□ 0.5
CDH4P55283 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDH4P55283 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC18.2■□□□□ 0.5
CDH4P55283 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDH4P55283 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CDH4P55283 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC18.19■□□□□ 0.5
CDH4P55283 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC18.19■□□□□ 0.5
CDH4P55283 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDH4P55283 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDH4P55283 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDH4P55283 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC18.19■□□□□ 0.5
CDH4P55283 CD276-201ENST00000318424 2738 ntTSL 5 BASIC18.19■□□□□ 0.5
CDH4P55283 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDH4P55283 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDH4P55283 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDH4P55283 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDH4P55283 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CDH4P55283 FUOM-202ENST00000368551 628 ntTSL 3 BASIC18.19■□□□□ 0.5
CDH4P55283 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC18.19■□□□□ 0.5
CDH4P55283 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CDH4P55283 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CDH4P55283 AC103564.2-201ENST00000432853 1299 ntBASIC18.19■□□□□ 0.5
CDH4P55283 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC18.19■□□□□ 0.5
CDH4P55283 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC18.19■□□□□ 0.5
CDH4P55283 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDH4P55283 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC18.19■□□□□ 0.5
CDH4P55283 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
CDH4P55283 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
CDH4P55283 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CDH4P55283 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC18.19■□□□□ 0.5
CDH4P55283 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC18.19■□□□□ 0.5
CDH4P55283 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDH4P55283 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CDH4P55283 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC18.19■□□□□ 0.5
CDH4P55283 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDH4P55283 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
CDH4P55283 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDH4P55283 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC18.19■□□□□ 0.5
CDH4P55283 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDH4P55283 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CDH4P55283 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CDH4P55283 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDH4P55283 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
CDH4P55283 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
CDH4P55283 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDH4P55283 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC18.18■□□□□ 0.5
CDH4P55283 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CDH4P55283 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDH4P55283 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.18■□□□□ 0.5
CDH4P55283 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDH4P55283 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
CDH4P55283 SAPCD2P3-201ENST00000455031 850 ntBASIC18.18■□□□□ 0.5
CDH4P55283 EMBP1-201ENST00000458200 901 ntBASIC18.18■□□□□ 0.5
CDH4P55283 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC18.18■□□□□ 0.5
CDH4P55283 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CDH4P55283 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CDH4P55283 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC18.18■□□□□ 0.5
CDH4P55283 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CDH4P55283 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDH4P55283 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDH4P55283 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC18.18■□□□□ 0.5
CDH4P55283 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
CDH4P55283 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC18.18■□□□□ 0.5
CDH4P55283 NOC2LP1-202ENST00000452600 2235 ntBASIC18.18■□□□□ 0.5
CDH4P55283 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDH4P55283 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDH4P55283 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
CDH4P55283 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC18.18■□□□□ 0.5
CDH4P55283 PXK-206ENST00000463280 2825 ntTSL 2 BASIC18.18■□□□□ 0.5
CDH4P55283 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDH4P55283 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC18.17■□□□□ 0.5
CDH4P55283 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC18.17■□□□□ 0.5
CDH4P55283 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDH4P55283 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC18.17■□□□□ 0.5
CDH4P55283 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDH4P55283 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDH4P55283 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDH4P55283 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDH4P55283 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC18.17■□□□□ 0.5
CDH4P55283 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
CDH4P55283 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDH4P55283 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CDH4P55283 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC18.17■□□□□ 0.5
CDH4P55283 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDH4P55283 MED16-201ENST00000269814 1199 ntTSL 5 BASIC18.17■□□□□ 0.5
CDH4P55283 AKR1C7P-201ENST00000305623 895 ntBASIC18.17■□□□□ 0.5
CDH4P55283 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms