Protein–RNA interactions for Protein: P51793

CLCN4, H(+)/Cl(-) exchange transporter 4, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4P51793 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC18.68■□□□□ 0.58
CLCN4P51793 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLCN4P51793 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
CLCN4P51793 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLCN4P51793 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC18.67■□□□□ 0.58
CLCN4P51793 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLCN4P51793 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLCN4P51793 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLCN4P51793 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLCN4P51793 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLCN4P51793 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC18.67■□□□□ 0.58
CLCN4P51793 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CLCN4P51793 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC18.67■□□□□ 0.58
CLCN4P51793 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC18.67■□□□□ 0.58
CLCN4P51793 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC18.67■□□□□ 0.58
CLCN4P51793 AL020989.1-201ENST00000422979 469 ntBASIC18.67■□□□□ 0.58
CLCN4P51793 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC18.67■□□□□ 0.58
CLCN4P51793 HMGN1P19-201ENST00000436976 333 ntBASIC18.67■□□□□ 0.58
CLCN4P51793 KRT18P2-201ENST00000447938 1258 ntBASIC18.67■□□□□ 0.58
CLCN4P51793 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC18.67■□□□□ 0.58
CLCN4P51793 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLCN4P51793 DUTP2-201ENST00000519164 463 ntBASIC18.67■□□□□ 0.58
CLCN4P51793 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC18.67■□□□□ 0.58
CLCN4P51793 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC18.67■□□□□ 0.58
CLCN4P51793 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC18.67■□□□□ 0.58
CLCN4P51793 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC18.67■□□□□ 0.58
CLCN4P51793 AC004706.3-202ENST00000621574 984 ntBASIC18.67■□□□□ 0.58
CLCN4P51793 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLCN4P51793 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLCN4P51793 AC022898.2-201ENST00000616822 1312 ntBASIC18.67■□□□□ 0.58
CLCN4P51793 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CLCN4P51793 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLCN4P51793 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC18.67■□□□□ 0.58
CLCN4P51793 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CLCN4P51793 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CLCN4P51793 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLCN4P51793 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC18.66■□□□□ 0.58
CLCN4P51793 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLCN4P51793 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLCN4P51793 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC18.66■□□□□ 0.58
CLCN4P51793 AL353593.2-201ENST00000602529 1483 ntBASIC18.66■□□□□ 0.58
CLCN4P51793 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLCN4P51793 SIRPAP1-201ENST00000448467 1770 ntBASIC18.66■□□□□ 0.58
CLCN4P51793 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CLCN4P51793 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
CLCN4P51793 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLCN4P51793 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLCN4P51793 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
CLCN4P51793 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLCN4P51793 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLCN4P51793 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC18.66■□□□□ 0.58
CLCN4P51793 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.66■□□□□ 0.58
CLCN4P51793 NKTR-203ENST00000442970 646 ntTSL 2 BASIC18.66■□□□□ 0.58
CLCN4P51793 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC18.66■□□□□ 0.58
CLCN4P51793 DNAJB3-202ENST00000449667 1266 ntBASIC18.66■□□□□ 0.58
CLCN4P51793 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC18.66■□□□□ 0.58
CLCN4P51793 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CLCN4P51793 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CLCN4P51793 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC18.66■□□□□ 0.58
CLCN4P51793 AL355385.1-201ENST00000606123 409 ntBASIC18.66■□□□□ 0.58
CLCN4P51793 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC18.66■□□□□ 0.58
CLCN4P51793 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLCN4P51793 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC18.66■□□□□ 0.58
CLCN4P51793 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC18.66■□□□□ 0.58
CLCN4P51793 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC18.66■□□□□ 0.58
CLCN4P51793 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC18.66■□□□□ 0.58
CLCN4P51793 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CLCN4P51793 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
CLCN4P51793 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLCN4P51793 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CLCN4P51793 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLCN4P51793 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.66■□□□□ 0.58
CLCN4P51793 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLCN4P51793 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLCN4P51793 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLCN4P51793 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
CLCN4P51793 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CLCN4P51793 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CLCN4P51793 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLCN4P51793 ADM-208ENST00000534464 1640 ntTSL 2 BASIC18.65■□□□□ 0.58
CLCN4P51793 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLCN4P51793 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLCN4P51793 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CLCN4P51793 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC18.65■□□□□ 0.58
CLCN4P51793 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC18.65■□□□□ 0.58
CLCN4P51793 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLCN4P51793 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC18.65■□□□□ 0.58
CLCN4P51793 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC18.65■□□□□ 0.58
CLCN4P51793 COX5A-206ENST00000568783 571 ntTSL 3 BASIC18.65■□□□□ 0.58
CLCN4P51793 AC027796.2-201ENST00000575326 344 ntBASIC18.65■□□□□ 0.58
CLCN4P51793 TCAP-202ENST00000578283 583 ntTSL 5 BASIC18.65■□□□□ 0.58
CLCN4P51793 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
CLCN4P51793 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLCN4P51793 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLCN4P51793 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLCN4P51793 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLCN4P51793 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLCN4P51793 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLCN4P51793 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.58
CLCN4P51793 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 67.3 ms