Protein–RNA interactions for Protein: P51686

CCR9, C-C chemokine receptor type 9, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9P51686 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CCR9P51686 LINC00304-203ENST00000565008 1864 ntBASIC15.71■□□□□ 0.11
CCR9P51686 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC15.71■□□□□ 0.11
CCR9P51686 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCR9P51686 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC15.71■□□□□ 0.11
CCR9P51686 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC15.71■□□□□ 0.11
CCR9P51686 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCR9P51686 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC15.71■□□□□ 0.11
CCR9P51686 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
CCR9P51686 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC15.71■□□□□ 0.11
CCR9P51686 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC15.71■□□□□ 0.11
CCR9P51686 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC15.71■□□□□ 0.11
CCR9P51686 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCR9P51686 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCR9P51686 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCR9P51686 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CCR9P51686 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC15.71■□□□□ 0.11
CCR9P51686 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC15.71■□□□□ 0.11
CCR9P51686 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC15.71■□□□□ 0.11
CCR9P51686 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC15.71■□□□□ 0.11
CCR9P51686 LINC01451-201ENST00000623792 534 ntBASIC15.71■□□□□ 0.11
CCR9P51686 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCR9P51686 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CCR9P51686 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCR9P51686 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC15.71■□□□□ 0.11
CCR9P51686 HLA-J-201ENST00000462773 1622 ntBASIC15.71■□□□□ 0.11
CCR9P51686 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC15.71■□□□□ 0.11
CCR9P51686 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
CCR9P51686 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
CCR9P51686 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC15.71■□□□□ 0.1
CCR9P51686 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC15.71■□□□□ 0.1
CCR9P51686 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC15.71■□□□□ 0.1
CCR9P51686 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CCR9P51686 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
CCR9P51686 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
CCR9P51686 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
CCR9P51686 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC15.71■□□□□ 0.1
CCR9P51686 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC15.71■□□□□ 0.1
CCR9P51686 MME-217ENST00000616757 1315 ntTSL 5 BASIC15.7■□□□□ 0.1
CCR9P51686 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
CCR9P51686 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
CCR9P51686 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CCR9P51686 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCR9P51686 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCR9P51686 LINC00167-201ENST00000530583 1419 ntBASIC15.7■□□□□ 0.1
CCR9P51686 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC15.7■□□□□ 0.1
CCR9P51686 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCR9P51686 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCR9P51686 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCR9P51686 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC15.7■□□□□ 0.1
CCR9P51686 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCR9P51686 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC15.7■□□□□ 0.1
CCR9P51686 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCR9P51686 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC15.7■□□□□ 0.1
CCR9P51686 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
CCR9P51686 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
CCR9P51686 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CCR9P51686 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCR9P51686 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCR9P51686 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCR9P51686 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCR9P51686 TSPY14P-201ENST00000303979 915 ntBASIC15.7■□□□□ 0.1
CCR9P51686 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC15.7■□□□□ 0.1
CCR9P51686 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC15.7■□□□□ 0.1
CCR9P51686 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC15.7■□□□□ 0.1
CCR9P51686 Z99916.2-201ENST00000604037 246 ntBASIC15.7■□□□□ 0.1
CCR9P51686 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCR9P51686 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCR9P51686 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
CCR9P51686 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCR9P51686 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC15.7■□□□□ 0.1
CCR9P51686 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
CCR9P51686 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCR9P51686 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCR9P51686 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCR9P51686 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CCR9P51686 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCR9P51686 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCR9P51686 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CCR9P51686 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
CCR9P51686 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC15.7■□□□□ 0.1
CCR9P51686 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCR9P51686 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
CCR9P51686 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
CCR9P51686 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCR9P51686 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCR9P51686 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC15.69■□□□□ 0.1
CCR9P51686 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCR9P51686 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CCR9P51686 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
CCR9P51686 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCR9P51686 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCR9P51686 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCR9P51686 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
CCR9P51686 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCR9P51686 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CCR9P51686 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCR9P51686 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCR9P51686 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC15.69■□□□□ 0.1
CCR9P51686 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms