Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
BRCA2P51587 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
BRCA2P51587 ARSEP1-201ENST00000420443 635 ntBASIC19.78■□□□□ 0.76
BRCA2P51587 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
BRCA2P51587 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
BRCA2P51587 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
BRCA2P51587 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
BRCA2P51587 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
BRCA2P51587 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
BRCA2P51587 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
BRCA2P51587 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC19.78■□□□□ 0.76
BRCA2P51587 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC19.78■□□□□ 0.76
BRCA2P51587 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC19.78■□□□□ 0.76
BRCA2P51587 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
BRCA2P51587 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
BRCA2P51587 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
BRCA2P51587 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
BRCA2P51587 FAM58CP-201ENST00000435741 640 ntBASIC19.78■□□□□ 0.76
BRCA2P51587 AC004449.1-201ENST00000564240 433 ntBASIC19.78■□□□□ 0.76
BRCA2P51587 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
BRCA2P51587 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
BRCA2P51587 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
BRCA2P51587 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC19.78■□□□□ 0.76
BRCA2P51587 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
BRCA2P51587 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
BRCA2P51587 CD63-210ENST00000550776 870 ntTSL 5 BASIC19.77■□□□□ 0.76
BRCA2P51587 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.76
BRCA2P51587 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
BRCA2P51587 AC096633.1-201ENST00000422446 749 ntBASIC19.77■□□□□ 0.76
BRCA2P51587 SRP19-202ENST00000445150 833 ntTSL 2 BASIC19.77■□□□□ 0.76
BRCA2P51587 AL359881.2-201ENST00000602973 570 ntBASIC19.77■□□□□ 0.76
BRCA2P51587 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
BRCA2P51587 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.75
BRCA2P51587 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
BRCA2P51587 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC19.77■□□□□ 0.75
BRCA2P51587 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC19.77■□□□□ 0.75
BRCA2P51587 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC19.77■□□□□ 0.75
BRCA2P51587 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC19.76■□□□□ 0.75
BRCA2P51587 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
BRCA2P51587 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
BRCA2P51587 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC19.76■□□□□ 0.75
BRCA2P51587 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC19.76■□□□□ 0.75
BRCA2P51587 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC19.76■□□□□ 0.75
BRCA2P51587 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC19.76■□□□□ 0.75
BRCA2P51587 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC19.76■□□□□ 0.75
BRCA2P51587 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
BRCA2P51587 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
BRCA2P51587 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
BRCA2P51587 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC19.76■□□□□ 0.75
BRCA2P51587 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
BRCA2P51587 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
BRCA2P51587 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC19.76■□□□□ 0.75
BRCA2P51587 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
BRCA2P51587 AL132655.2-201ENST00000596276 594 ntBASIC19.76■□□□□ 0.75
BRCA2P51587 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
BRCA2P51587 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
BRCA2P51587 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
BRCA2P51587 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
BRCA2P51587 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
BRCA2P51587 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC19.76■□□□□ 0.75
BRCA2P51587 CENPM-205ENST00000404067 905 ntTSL 3 BASIC19.76■□□□□ 0.75
BRCA2P51587 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC19.76■□□□□ 0.75
BRCA2P51587 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC19.76■□□□□ 0.75
BRCA2P51587 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC19.76■□□□□ 0.75
BRCA2P51587 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
BRCA2P51587 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
BRCA2P51587 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
BRCA2P51587 HNRNPFP1-201ENST00000391730 1133 ntBASIC19.75■□□□□ 0.75
BRCA2P51587 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC19.75■□□□□ 0.75
BRCA2P51587 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC19.75■□□□□ 0.75
BRCA2P51587 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC19.75■□□□□ 0.75
BRCA2P51587 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC19.75■□□□□ 0.75
BRCA2P51587 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC19.75■□□□□ 0.75
BRCA2P51587 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC19.75■□□□□ 0.75
BRCA2P51587 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
BRCA2P51587 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC19.75■□□□□ 0.75
BRCA2P51587 SERBP1P5-201ENST00000510079 1181 ntBASIC19.75■□□□□ 0.75
BRCA2P51587 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
BRCA2P51587 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
BRCA2P51587 AL596325.1-201ENST00000563991 1082 ntBASIC19.75■□□□□ 0.75
BRCA2P51587 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC19.75■□□□□ 0.75
BRCA2P51587 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
BRCA2P51587 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC19.75■□□□□ 0.75
BRCA2P51587 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
BRCA2P51587 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC19.75■□□□□ 0.75
BRCA2P51587 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC19.75■□□□□ 0.75
BRCA2P51587 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
BRCA2P51587 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC19.74■□□□□ 0.75
BRCA2P51587 AC125807.1-201ENST00000483097 614 ntBASIC19.74■□□□□ 0.75
BRCA2P51587 MYLKP1-201ENST00000509077 1580 ntBASIC19.74■□□□□ 0.75
BRCA2P51587 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
BRCA2P51587 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC19.74■□□□□ 0.75
BRCA2P51587 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC19.74■□□□□ 0.75
BRCA2P51587 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC19.74■□□□□ 0.75
BRCA2P51587 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
BRCA2P51587 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC19.74■□□□□ 0.75
BRCA2P51587 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC19.74■□□□□ 0.75
BRCA2P51587 FO538757.1-201ENST00000623083 1397 ntBASIC19.74■□□□□ 0.75
BRCA2P51587 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC19.74■□□□□ 0.75
BRCA2P51587 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms