Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC20.17■□□□□ 0.82
TM4SF4P48230 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TM4SF4P48230 OR8S1-201ENST00000310194 1080 ntBASIC20.17■□□□□ 0.82
TM4SF4P48230 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TM4SF4P48230 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TM4SF4P48230 RPL30-202ENST00000396070 440 ntTSL 2 BASIC20.17■□□□□ 0.82
TM4SF4P48230 RAC2-204ENST00000406508 893 ntTSL 5 BASIC20.17■□□□□ 0.82
TM4SF4P48230 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC20.17■□□□□ 0.82
TM4SF4P48230 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC20.17■□□□□ 0.82
TM4SF4P48230 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC20.17■□□□□ 0.82
TM4SF4P48230 AL592309.1-201ENST00000443127 649 ntBASIC20.17■□□□□ 0.82
TM4SF4P48230 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC20.17■□□□□ 0.82
TM4SF4P48230 SPDYE11-202ENST00000450699 704 ntBASIC20.17■□□□□ 0.82
TM4SF4P48230 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC20.17■□□□□ 0.82
TM4SF4P48230 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC20.17■□□□□ 0.82
TM4SF4P48230 SPDYE9P-201ENST00000570642 692 ntBASIC20.17■□□□□ 0.82
TM4SF4P48230 SPDYE10P-202ENST00000612005 668 ntBASIC20.17■□□□□ 0.82
TM4SF4P48230 ACTL9-202ENST00000612068 1252 ntBASIC20.17■□□□□ 0.82
TM4SF4P48230 SPDYE8P-202ENST00000612377 668 ntBASIC20.17■□□□□ 0.82
TM4SF4P48230 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC20.17■□□□□ 0.82
TM4SF4P48230 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.17■□□□□ 0.82
TM4SF4P48230 ME2-218ENST00000640965 2476 ntTSL 5 BASIC20.17■□□□□ 0.82
TM4SF4P48230 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TM4SF4P48230 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TM4SF4P48230 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC20.17■□□□□ 0.82
TM4SF4P48230 AC009336.1-201ENST00000608941 1553 ntBASIC20.17■□□□□ 0.82
TM4SF4P48230 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
TM4SF4P48230 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC20.16■□□□□ 0.82
TM4SF4P48230 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.16■□□□□ 0.82
TM4SF4P48230 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC20.16■□□□□ 0.82
TM4SF4P48230 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TM4SF4P48230 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TM4SF4P48230 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TM4SF4P48230 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
TM4SF4P48230 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TM4SF4P48230 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
TM4SF4P48230 FAM58DP-201ENST00000428076 619 ntBASIC20.16■□□□□ 0.82
TM4SF4P48230 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC20.16■□□□□ 0.82
TM4SF4P48230 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC20.16■□□□□ 0.82
TM4SF4P48230 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC20.16■□□□□ 0.82
TM4SF4P48230 TMED1-207ENST00000591695 809 ntTSL 5 BASIC20.16■□□□□ 0.82
TM4SF4P48230 AL359881.2-201ENST00000602973 570 ntBASIC20.16■□□□□ 0.82
TM4SF4P48230 AC099522.2-201ENST00000607001 744 ntBASIC20.16■□□□□ 0.82
TM4SF4P48230 HFE2-206ENST00000634927 506 ntTSL 4 BASIC20.16■□□□□ 0.82
TM4SF4P48230 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TM4SF4P48230 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
TM4SF4P48230 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TM4SF4P48230 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TM4SF4P48230 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TM4SF4P48230 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
TM4SF4P48230 AC007952.6-201ENST00000573168 2673 ntBASIC20.16■□□□□ 0.82
TM4SF4P48230 AC003957.1-201ENST00000625108 2673 ntBASIC20.16■□□□□ 0.82
TM4SF4P48230 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TM4SF4P48230 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.16■□□□□ 0.82
TM4SF4P48230 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC20.16■□□□□ 0.82
TM4SF4P48230 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TM4SF4P48230 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TM4SF4P48230 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
TM4SF4P48230 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC20.15■□□□□ 0.82
TM4SF4P48230 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TM4SF4P48230 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.15■□□□□ 0.82
TM4SF4P48230 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC20.15■□□□□ 0.82
TM4SF4P48230 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TM4SF4P48230 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
TM4SF4P48230 AC107890.1-201ENST00000422478 521 ntBASIC20.15■□□□□ 0.82
TM4SF4P48230 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC20.15■□□□□ 0.82
TM4SF4P48230 TSFM-210ENST00000550559 897 ntTSL 5 BASIC20.15■□□□□ 0.82
TM4SF4P48230 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC20.15■□□□□ 0.82
TM4SF4P48230 COQ6-210ENST00000554920 649 ntTSL 3 BASIC20.15■□□□□ 0.82
TM4SF4P48230 RPL28-209ENST00000560055 670 ntTSL 3 BASIC20.15■□□□□ 0.82
TM4SF4P48230 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
TM4SF4P48230 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC20.15■□□□□ 0.82
TM4SF4P48230 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TM4SF4P48230 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TM4SF4P48230 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
TM4SF4P48230 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC20.14■□□□□ 0.82
TM4SF4P48230 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
TM4SF4P48230 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC20.14■□□□□ 0.81
TM4SF4P48230 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
TM4SF4P48230 AL590787.1-201ENST00000568856 1315 ntBASIC20.14■□□□□ 0.81
TM4SF4P48230 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TM4SF4P48230 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TM4SF4P48230 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC20.14■□□□□ 0.81
TM4SF4P48230 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC20.14■□□□□ 0.81
TM4SF4P48230 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC20.14■□□□□ 0.81
TM4SF4P48230 GPS2P2-201ENST00000430745 888 ntBASIC20.14■□□□□ 0.81
TM4SF4P48230 AC079140.1-201ENST00000508039 487 ntBASIC20.14■□□□□ 0.81
TM4SF4P48230 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC20.14■□□□□ 0.81
TM4SF4P48230 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC20.14■□□□□ 0.81
TM4SF4P48230 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC20.14■□□□□ 0.81
TM4SF4P48230 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TM4SF4P48230 AC140878.1-201ENST00000565277 250 ntBASIC20.14■□□□□ 0.81
TM4SF4P48230 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC20.14■□□□□ 0.81
TM4SF4P48230 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TM4SF4P48230 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
TM4SF4P48230 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
TM4SF4P48230 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
TM4SF4P48230 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TM4SF4P48230 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
TM4SF4P48230 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms