Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC18.06■□□□□ 0.48
HADHAP40939 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
HADHAP40939 AC132938.6-201ENST00000623828 1655 ntBASIC18.06■□□□□ 0.48
HADHAP40939 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
HADHAP40939 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HADHAP40939 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
HADHAP40939 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
HADHAP40939 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HADHAP40939 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HADHAP40939 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HADHAP40939 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
HADHAP40939 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
HADHAP40939 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HADHAP40939 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
HADHAP40939 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC18.05■□□□□ 0.48
HADHAP40939 AC012317.2-201ENST00000623305 2251 ntBASIC18.05■□□□□ 0.48
HADHAP40939 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC18.05■□□□□ 0.48
HADHAP40939 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HADHAP40939 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HADHAP40939 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC18.05■□□□□ 0.48
HADHAP40939 IGHGP-201ENST00000390555 1178 ntBASIC18.05■□□□□ 0.48
HADHAP40939 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HADHAP40939 DDT-203ENST00000403754 569 ntTSL 3 BASIC18.05■□□□□ 0.48
HADHAP40939 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC18.05■□□□□ 0.48
HADHAP40939 DDT-206ENST00000430101 573 ntTSL 2 BASIC18.05■□□□□ 0.48
HADHAP40939 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC18.05■□□□□ 0.48
HADHAP40939 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
HADHAP40939 CLN6-204ENST00000564752 900 ntTSL 3 BASIC18.05■□□□□ 0.48
HADHAP40939 NAA38-203ENST00000575071 553 ntTSL 2 BASIC18.05■□□□□ 0.48
HADHAP40939 CLN6-214ENST00000636314 442 ntTSL 3 BASIC18.05■□□□□ 0.48
HADHAP40939 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HADHAP40939 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HADHAP40939 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC18.05■□□□□ 0.48
HADHAP40939 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC18.05■□□□□ 0.48
HADHAP40939 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HADHAP40939 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
HADHAP40939 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
HADHAP40939 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HADHAP40939 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HADHAP40939 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HADHAP40939 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HADHAP40939 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HADHAP40939 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC18.04■□□□□ 0.48
HADHAP40939 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HADHAP40939 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
HADHAP40939 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HADHAP40939 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC18.04■□□□□ 0.48
HADHAP40939 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HADHAP40939 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC18.04■□□□□ 0.48
HADHAP40939 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
HADHAP40939 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
HADHAP40939 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HADHAP40939 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
HADHAP40939 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
HADHAP40939 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
HADHAP40939 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HADHAP40939 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HADHAP40939 GUK1-204ENST00000366721 689 ntTSL 3 BASIC18.04■□□□□ 0.48
HADHAP40939 KRT18P65-201ENST00000439811 1286 ntBASIC18.04■□□□□ 0.48
HADHAP40939 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
HADHAP40939 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC18.04■□□□□ 0.48
HADHAP40939 VENTXP5-201ENST00000523979 775 ntBASIC18.04■□□□□ 0.48
HADHAP40939 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC18.04■□□□□ 0.48
HADHAP40939 GPR32P1-201ENST00000601788 811 ntBASIC18.04■□□□□ 0.48
HADHAP40939 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
HADHAP40939 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
HADHAP40939 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC18.04■□□□□ 0.48
HADHAP40939 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HADHAP40939 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC18.04■□□□□ 0.48
HADHAP40939 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
HADHAP40939 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
HADHAP40939 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
HADHAP40939 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HADHAP40939 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HADHAP40939 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HADHAP40939 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
HADHAP40939 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
HADHAP40939 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
HADHAP40939 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
HADHAP40939 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
HADHAP40939 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
HADHAP40939 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HADHAP40939 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HADHAP40939 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC18.03■□□□□ 0.48
HADHAP40939 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC18.03■□□□□ 0.48
HADHAP40939 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
HADHAP40939 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC18.03■□□□□ 0.48
HADHAP40939 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC18.03■□□□□ 0.48
HADHAP40939 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC18.03■□□□□ 0.48
HADHAP40939 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC18.03■□□□□ 0.48
HADHAP40939 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC18.03■□□□□ 0.48
HADHAP40939 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC18.03■□□□□ 0.48
HADHAP40939 AC004263.2-201ENST00000617183 678 ntBASIC18.03■□□□□ 0.48
HADHAP40939 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HADHAP40939 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HADHAP40939 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
HADHAP40939 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
HADHAP40939 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC18.03■□□□□ 0.48
HADHAP40939 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HADHAP40939 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms