Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PTPN6P29350 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC16.93■□□□□ 0.3
PTPN6P29350 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PTPN6P29350 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PTPN6P29350 PBK-203ENST00000522944 1499 ntTSL 2 BASIC16.93■□□□□ 0.3
PTPN6P29350 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
PTPN6P29350 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PTPN6P29350 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PTPN6P29350 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
PTPN6P29350 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
PTPN6P29350 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
PTPN6P29350 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PTPN6P29350 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PTPN6P29350 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
PTPN6P29350 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PTPN6P29350 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC16.92■□□□□ 0.3
PTPN6P29350 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC16.92■□□□□ 0.3
PTPN6P29350 AC087388.1-201ENST00000571370 1112 ntBASIC16.92■□□□□ 0.3
PTPN6P29350 NT5C-211ENST00000582170 653 ntTSL 3 BASIC16.92■□□□□ 0.3
PTPN6P29350 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
PTPN6P29350 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC16.92■□□□□ 0.3
PTPN6P29350 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC16.92■□□□□ 0.3
PTPN6P29350 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC16.92■□□□□ 0.3
PTPN6P29350 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC16.92■□□□□ 0.3
PTPN6P29350 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC16.92■□□□□ 0.3
PTPN6P29350 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
PTPN6P29350 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PTPN6P29350 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC16.92■□□□□ 0.3
PTPN6P29350 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PTPN6P29350 MED25-212ENST00000618715 1467 ntTSL 5 BASIC16.92■□□□□ 0.3
PTPN6P29350 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
PTPN6P29350 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
PTPN6P29350 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
PTPN6P29350 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
PTPN6P29350 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
PTPN6P29350 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PTPN6P29350 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
PTPN6P29350 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC16.91■□□□□ 0.3
PTPN6P29350 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC16.91■□□□□ 0.3
PTPN6P29350 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PTPN6P29350 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PTPN6P29350 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC16.91■□□□□ 0.3
PTPN6P29350 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
PTPN6P29350 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC16.91■□□□□ 0.3
PTPN6P29350 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PTPN6P29350 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
PTPN6P29350 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PTPN6P29350 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC16.91■□□□□ 0.3
PTPN6P29350 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC16.91■□□□□ 0.3
PTPN6P29350 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
PTPN6P29350 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PTPN6P29350 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
PTPN6P29350 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PTPN6P29350 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PTPN6P29350 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PTPN6P29350 SPDYE15P-201ENST00000424157 909 ntBASIC16.91■□□□□ 0.3
PTPN6P29350 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PTPN6P29350 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC16.91■□□□□ 0.3
PTPN6P29350 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC16.91■□□□□ 0.3
PTPN6P29350 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PTPN6P29350 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC16.91■□□□□ 0.3
PTPN6P29350 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC16.91■□□□□ 0.3
PTPN6P29350 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC16.91■□□□□ 0.3
PTPN6P29350 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PTPN6P29350 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PTPN6P29350 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PTPN6P29350 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC16.91■□□□□ 0.3
PTPN6P29350 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC16.91■□□□□ 0.3
PTPN6P29350 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PTPN6P29350 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PTPN6P29350 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC16.91■□□□□ 0.3
PTPN6P29350 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PTPN6P29350 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC16.91■□□□□ 0.3
PTPN6P29350 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PTPN6P29350 AC022898.2-201ENST00000616822 1312 ntBASIC16.91■□□□□ 0.3
PTPN6P29350 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
PTPN6P29350 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
PTPN6P29350 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
PTPN6P29350 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC16.91■□□□□ 0.3
PTPN6P29350 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PTPN6P29350 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PTPN6P29350 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
PTPN6P29350 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PTPN6P29350 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
PTPN6P29350 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC16.9■□□□□ 0.3
PTPN6P29350 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PTPN6P29350 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
PTPN6P29350 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PTPN6P29350 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC16.9■□□□□ 0.3
PTPN6P29350 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PTPN6P29350 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC16.9■□□□□ 0.3
PTPN6P29350 HLA-J-201ENST00000462773 1622 ntBASIC16.9■□□□□ 0.3
PTPN6P29350 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PTPN6P29350 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PTPN6P29350 AL031133.1-201ENST00000406807 723 ntBASIC16.9■□□□□ 0.3
PTPN6P29350 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC16.9■□□□□ 0.3
PTPN6P29350 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC16.9■□□□□ 0.3
PTPN6P29350 AC034232.1-201ENST00000506026 1064 ntBASIC16.9■□□□□ 0.3
PTPN6P29350 AC113404.2-201ENST00000507884 177 ntBASIC16.9■□□□□ 0.3
PTPN6P29350 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms