Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
PTPN3P26045 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
PTPN3P26045 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
PTPN3P26045 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC18.18■□□□□ 0.5
PTPN3P26045 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PTPN3P26045 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PTPN3P26045 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PTPN3P26045 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC18.18■□□□□ 0.5
PTPN3P26045 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC18.18■□□□□ 0.5
PTPN3P26045 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PTPN3P26045 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
PTPN3P26045 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
PTPN3P26045 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
PTPN3P26045 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PTPN3P26045 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PTPN3P26045 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PTPN3P26045 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC18.17■□□□□ 0.5
PTPN3P26045 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
PTPN3P26045 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PTPN3P26045 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
PTPN3P26045 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PTPN3P26045 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC18.17■□□□□ 0.5
PTPN3P26045 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
PTPN3P26045 CNP-204ENST00000472031 1019 ntTSL 2 BASIC18.17■□□□□ 0.5
PTPN3P26045 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC18.17■□□□□ 0.5
PTPN3P26045 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC18.17■□□□□ 0.5
PTPN3P26045 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC18.17■□□□□ 0.5
PTPN3P26045 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC18.17■□□□□ 0.5
PTPN3P26045 AC133963.1-201ENST00000504166 1679 ntBASIC18.17■□□□□ 0.5
PTPN3P26045 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC18.17■□□□□ 0.5
PTPN3P26045 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
PTPN3P26045 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PTPN3P26045 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC18.17■□□□□ 0.5
PTPN3P26045 AC005332.1-201ENST00000577698 1310 ntBASIC18.17■□□□□ 0.5
PTPN3P26045 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PTPN3P26045 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PTPN3P26045 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PTPN3P26045 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PTPN3P26045 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PTPN3P26045 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
PTPN3P26045 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PTPN3P26045 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PTPN3P26045 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PTPN3P26045 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PTPN3P26045 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
PTPN3P26045 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PTPN3P26045 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PTPN3P26045 RN7SL606P-201ENST00000472779 293 ntBASIC18.16■□□□□ 0.5
PTPN3P26045 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PTPN3P26045 FAM86EP-206ENST00000510506 987 ntBASIC18.16■□□□□ 0.5
PTPN3P26045 CD320-202ENST00000537716 1119 ntTSL 2 BASIC18.16■□□□□ 0.5
PTPN3P26045 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC18.16■□□□□ 0.5
PTPN3P26045 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC18.16■□□□□ 0.5
PTPN3P26045 VPS72-207ENST00000640458 689 ntTSL 5 BASIC18.16■□□□□ 0.5
PTPN3P26045 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PTPN3P26045 PP12613-201ENST00000424958 2230 ntBASIC18.16■□□□□ 0.5
PTPN3P26045 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PTPN3P26045 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PTPN3P26045 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PTPN3P26045 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC18.16■□□□□ 0.5
PTPN3P26045 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PTPN3P26045 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
PTPN3P26045 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC18.16■□□□□ 0.5
PTPN3P26045 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PTPN3P26045 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PTPN3P26045 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
PTPN3P26045 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC18.15■□□□□ 0.5
PTPN3P26045 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
PTPN3P26045 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
PTPN3P26045 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PTPN3P26045 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC18.15■□□□□ 0.5
PTPN3P26045 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
PTPN3P26045 BET1L-202ENST00000332865 533 ntTSL 5 BASIC18.15■□□□□ 0.5
PTPN3P26045 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
PTPN3P26045 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PTPN3P26045 FXN-203ENST00000396366 922 ntTSL 2 BASIC18.15■□□□□ 0.5
PTPN3P26045 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC18.15■□□□□ 0.5
PTPN3P26045 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC18.15■□□□□ 0.5
PTPN3P26045 GUSBP12-201ENST00000513727 720 ntBASIC18.15■□□□□ 0.5
PTPN3P26045 PTK2-216ENST00000519881 863 ntTSL 3 BASIC18.15■□□□□ 0.5
PTPN3P26045 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
PTPN3P26045 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC18.15■□□□□ 0.5
PTPN3P26045 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC18.15■□□□□ 0.5
PTPN3P26045 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PTPN3P26045 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC18.15■□□□□ 0.5
PTPN3P26045 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
PTPN3P26045 HR-201ENST00000312841 5351 ntTSL 5 BASIC18.15■□□□□ 0.5
PTPN3P26045 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
PTPN3P26045 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
PTPN3P26045 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PTPN3P26045 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PTPN3P26045 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PTPN3P26045 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
PTPN3P26045 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC18.15■□□□□ 0.5
PTPN3P26045 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PTPN3P26045 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PTPN3P26045 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC18.14■□□□□ 0.5
PTPN3P26045 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PTPN3P26045 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PTPN3P26045 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms