Protein–RNA interactions for Protein: P0C7W6

CCDC172, Coiled-coil domain-containing protein 172, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172P0C7W6 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC19.3■□□□□ 0.68
CCDC172P0C7W6 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC172P0C7W6 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC19.3■□□□□ 0.68
CCDC172P0C7W6 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC172P0C7W6 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC172P0C7W6 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC172P0C7W6 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC172P0C7W6 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC19.3■□□□□ 0.68
CCDC172P0C7W6 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
CCDC172P0C7W6 AC024563.2-201ENST00000603282 481 ntBASIC19.3■□□□□ 0.68
CCDC172P0C7W6 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC19.3■□□□□ 0.68
CCDC172P0C7W6 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC19.3■□□□□ 0.68
CCDC172P0C7W6 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC172P0C7W6 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC172P0C7W6 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC172P0C7W6 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC19.3■□□□□ 0.68
CCDC172P0C7W6 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC172P0C7W6 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC172P0C7W6 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC19.3■□□□□ 0.68
CCDC172P0C7W6 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC172P0C7W6 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC172P0C7W6 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC172P0C7W6 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC172P0C7W6 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC172P0C7W6 LINC00602-201ENST00000629776 2065 ntBASIC19.29■□□□□ 0.68
CCDC172P0C7W6 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC172P0C7W6 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC172P0C7W6 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC172P0C7W6 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC19.29■□□□□ 0.68
CCDC172P0C7W6 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC172P0C7W6 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC172P0C7W6 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC19.29■□□□□ 0.68
CCDC172P0C7W6 CD81-212ENST00000526072 1172 ntTSL 5 BASIC19.29■□□□□ 0.68
CCDC172P0C7W6 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC19.29■□□□□ 0.68
CCDC172P0C7W6 GCSHP2-201ENST00000560971 527 ntBASIC19.29■□□□□ 0.68
CCDC172P0C7W6 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC172P0C7W6 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
CCDC172P0C7W6 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC172P0C7W6 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC19.29■□□□□ 0.68
CCDC172P0C7W6 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC172P0C7W6 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC172P0C7W6 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC172P0C7W6 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC172P0C7W6 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
CCDC172P0C7W6 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC172P0C7W6 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC172P0C7W6 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC19.28■□□□□ 0.68
CCDC172P0C7W6 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC19.28■□□□□ 0.68
CCDC172P0C7W6 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC172P0C7W6 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC172P0C7W6 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC172P0C7W6 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC172P0C7W6 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC172P0C7W6 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC19.28■□□□□ 0.68
CCDC172P0C7W6 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC19.28■□□□□ 0.68
CCDC172P0C7W6 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC19.28■□□□□ 0.68
CCDC172P0C7W6 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC172P0C7W6 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC172P0C7W6 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
CCDC172P0C7W6 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC19.28■□□□□ 0.68
CCDC172P0C7W6 ATP5G1P1-201ENST00000448724 379 ntBASIC19.28■□□□□ 0.68
CCDC172P0C7W6 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC172P0C7W6 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC19.28■□□□□ 0.68
CCDC172P0C7W6 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC19.28■□□□□ 0.68
CCDC172P0C7W6 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC172P0C7W6 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC172P0C7W6 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
CCDC172P0C7W6 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC172P0C7W6 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC172P0C7W6 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC172P0C7W6 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC172P0C7W6 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC172P0C7W6 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC172P0C7W6 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC172P0C7W6 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC19.28■□□□□ 0.68
CCDC172P0C7W6 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC19.28■□□□□ 0.68
CCDC172P0C7W6 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC172P0C7W6 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC172P0C7W6 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC172P0C7W6 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC172P0C7W6 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC19.27■□□□□ 0.68
CCDC172P0C7W6 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC172P0C7W6 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC19.27■□□□□ 0.68
CCDC172P0C7W6 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC172P0C7W6 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC172P0C7W6 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC172P0C7W6 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC172P0C7W6 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC172P0C7W6 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC172P0C7W6 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC19.27■□□□□ 0.68
CCDC172P0C7W6 AC087499.1-201ENST00000418141 1075 ntBASIC19.27■□□□□ 0.68
CCDC172P0C7W6 KRT18P65-201ENST00000439811 1286 ntBASIC19.27■□□□□ 0.68
CCDC172P0C7W6 SLC25A3P1-201ENST00000443844 931 ntBASIC19.27■□□□□ 0.68
CCDC172P0C7W6 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC172P0C7W6 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
CCDC172P0C7W6 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC19.27■□□□□ 0.68
CCDC172P0C7W6 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC19.27■□□□□ 0.68
CCDC172P0C7W6 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC19.27■□□□□ 0.68
CCDC172P0C7W6 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC19.27■□□□□ 0.68
CCDC172P0C7W6 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC19.27■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms