Protein–RNA interactions for Protein: P07951

TPM2, Tropomyosin beta chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM2P07951 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC20.33■□□□□ 0.84
TPM2P07951 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC20.33■□□□□ 0.84
TPM2P07951 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
TPM2P07951 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC20.33■□□□□ 0.84
TPM2P07951 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
TPM2P07951 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
TPM2P07951 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC20.33■□□□□ 0.84
TPM2P07951 NFIC-211ENST00000641145 8399 ntBASIC20.33■□□□□ 0.84
TPM2P07951 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
TPM2P07951 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
TPM2P07951 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC20.33■□□□□ 0.84
TPM2P07951 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
TPM2P07951 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
TPM2P07951 FUK-207ENST00000571514 3054 ntTSL 2 BASIC20.33■□□□□ 0.84
TPM2P07951 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC20.32■□□□□ 0.84
TPM2P07951 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC20.32■□□□□ 0.84
TPM2P07951 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TPM2P07951 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TPM2P07951 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC20.32■□□□□ 0.84
TPM2P07951 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TPM2P07951 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC20.32■□□□□ 0.84
TPM2P07951 MYB-242ENST00000618728 3545 ntTSL 5 BASIC20.32■□□□□ 0.84
TPM2P07951 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
TPM2P07951 MCCD1P1-208ENST00000445732 328 ntBASIC20.32■□□□□ 0.84
TPM2P07951 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TPM2P07951 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC20.32■□□□□ 0.84
TPM2P07951 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC20.32■□□□□ 0.84
TPM2P07951 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC20.32■□□□□ 0.84
TPM2P07951 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC20.32■□□□□ 0.84
TPM2P07951 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TPM2P07951 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
TPM2P07951 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
TPM2P07951 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC20.32■□□□□ 0.84
TPM2P07951 AC008556.1-201ENST00000610908 2040 ntBASIC20.32■□□□□ 0.84
TPM2P07951 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
TPM2P07951 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC20.32■□□□□ 0.84
TPM2P07951 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TPM2P07951 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC20.32■□□□□ 0.84
TPM2P07951 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC20.32■□□□□ 0.84
TPM2P07951 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TPM2P07951 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
TPM2P07951 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TPM2P07951 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC20.31■□□□□ 0.84
TPM2P07951 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TPM2P07951 BANP-201ENST00000286122 2368 ntTSL 5 BASIC20.31■□□□□ 0.84
TPM2P07951 FRMD6-AS1-201ENST00000617151 2229 ntBASIC20.31■□□□□ 0.84
TPM2P07951 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC20.31■□□□□ 0.84
TPM2P07951 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
TPM2P07951 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TPM2P07951 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TPM2P07951 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC20.31■□□□□ 0.84
TPM2P07951 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
TPM2P07951 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC20.31■□□□□ 0.84
TPM2P07951 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TPM2P07951 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC20.31■□□□□ 0.84
TPM2P07951 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC20.31■□□□□ 0.84
TPM2P07951 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TPM2P07951 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC20.31■□□□□ 0.84
TPM2P07951 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
TPM2P07951 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TPM2P07951 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TPM2P07951 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
TPM2P07951 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
TPM2P07951 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TPM2P07951 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TPM2P07951 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC20.3■□□□□ 0.84
TPM2P07951 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TPM2P07951 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
TPM2P07951 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC20.3■□□□□ 0.84
TPM2P07951 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
TPM2P07951 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TPM2P07951 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TPM2P07951 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
TPM2P07951 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TPM2P07951 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
TPM2P07951 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC20.3■□□□□ 0.84
TPM2P07951 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
TPM2P07951 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC20.3■□□□□ 0.84
TPM2P07951 CFL2-205ENST00000555765 632 ntTSL 2 BASIC20.3■□□□□ 0.84
TPM2P07951 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC20.3■□□□□ 0.84
TPM2P07951 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
TPM2P07951 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC20.3■□□□□ 0.84
TPM2P07951 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC20.3■□□□□ 0.84
TPM2P07951 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TPM2P07951 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC20.3■□□□□ 0.84
TPM2P07951 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
TPM2P07951 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
TPM2P07951 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
TPM2P07951 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TPM2P07951 PCDHB17P-201ENST00000539533 2393 ntBASIC20.3■□□□□ 0.84
TPM2P07951 AC093677.2-201ENST00000600169 1863 ntBASIC20.3■□□□□ 0.84
TPM2P07951 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TPM2P07951 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TPM2P07951 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TPM2P07951 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TPM2P07951 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TPM2P07951 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC20.3■□□□□ 0.84
TPM2P07951 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC20.3■□□□□ 0.84
TPM2P07951 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TPM2P07951 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms