Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
COL1A1P02452 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC21.33■■□□□ 1.01
COL1A1P02452 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
COL1A1P02452 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC21.33■■□□□ 1.01
COL1A1P02452 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC21.33■■□□□ 1.01
COL1A1P02452 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC21.33■■□□□ 1.01
COL1A1P02452 AL355385.1-201ENST00000606123 409 ntBASIC21.33■■□□□ 1.01
COL1A1P02452 AC079781.4-201ENST00000641908 219 ntBASIC21.33■■□□□ 1.01
COL1A1P02452 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
COL1A1P02452 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
COL1A1P02452 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC21.33■■□□□ 1.01
COL1A1P02452 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
COL1A1P02452 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
COL1A1P02452 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC21.33■■□□□ 1.01
COL1A1P02452 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
COL1A1P02452 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC21.33■■□□□ 1.01
COL1A1P02452 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC21.33■■□□□ 1
COL1A1P02452 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC21.33■■□□□ 1
COL1A1P02452 BICD1-207ENST00000551848 1962 ntBASIC21.33■■□□□ 1
COL1A1P02452 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
COL1A1P02452 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC21.33■■□□□ 1
COL1A1P02452 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
COL1A1P02452 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC21.33■■□□□ 1
COL1A1P02452 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
COL1A1P02452 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
COL1A1P02452 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC21.33■■□□□ 1
COL1A1P02452 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
COL1A1P02452 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC21.33■■□□□ 1
COL1A1P02452 HLA-DQB1-201ENST00000374943 1656 ntBASIC21.33■■□□□ 1
COL1A1P02452 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC21.33■■□□□ 1
COL1A1P02452 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
COL1A1P02452 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
COL1A1P02452 BEX3-201ENST00000361298 921 ntTSL 2 BASIC21.32■■□□□ 1
COL1A1P02452 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC21.32■■□□□ 1
COL1A1P02452 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC21.32■■□□□ 1
COL1A1P02452 COA5-202ENST00000409997 557 ntTSL 4 BASIC21.32■■□□□ 1
COL1A1P02452 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC21.32■■□□□ 1
COL1A1P02452 AC009947.1-201ENST00000444350 727 ntBASIC21.32■■□□□ 1
COL1A1P02452 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC21.32■■□□□ 1
COL1A1P02452 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC21.32■■□□□ 1
COL1A1P02452 STK25P1-201ENST00000585406 838 ntBASIC21.32■■□□□ 1
COL1A1P02452 AL139424.1-201ENST00000607572 797 ntBASIC21.32■■□□□ 1
COL1A1P02452 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC21.32■■□□□ 1
COL1A1P02452 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC21.32■■□□□ 1
COL1A1P02452 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC21.32■■□□□ 1
COL1A1P02452 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC21.32■■□□□ 1
COL1A1P02452 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC21.32■■□□□ 1
COL1A1P02452 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
COL1A1P02452 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC21.32■■□□□ 1
COL1A1P02452 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC21.32■■□□□ 1
COL1A1P02452 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
COL1A1P02452 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC21.32■■□□□ 1
COL1A1P02452 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC21.32■■□□□ 1
COL1A1P02452 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC21.32■■□□□ 1
COL1A1P02452 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
COL1A1P02452 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
COL1A1P02452 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC21.32■■□□□ 1
COL1A1P02452 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
COL1A1P02452 KRT18P55-202ENST00000578578 1546 ntBASIC21.32■■□□□ 1
COL1A1P02452 BX276092.7-203ENST00000637198 1536 ntBASIC21.32■■□□□ 1
COL1A1P02452 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC21.32■■□□□ 1
COL1A1P02452 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
COL1A1P02452 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
COL1A1P02452 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
COL1A1P02452 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC21.32■■□□□ 1
COL1A1P02452 COX5A-202ENST00000562233 441 ntTSL 3 BASIC21.32■■□□□ 1
COL1A1P02452 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC21.32■■□□□ 1
COL1A1P02452 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC21.32■■□□□ 1
COL1A1P02452 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC21.32■■□□□ 1
COL1A1P02452 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
COL1A1P02452 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
COL1A1P02452 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC21.31■■□□□ 1
COL1A1P02452 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC21.31■■□□□ 1
COL1A1P02452 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC21.31■■□□□ 1
COL1A1P02452 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
COL1A1P02452 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC21.31■■□□□ 1
COL1A1P02452 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC21.31■■□□□ 1
COL1A1P02452 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC21.31■■□□□ 1
COL1A1P02452 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
COL1A1P02452 AC003669.1-201ENST00000334569 611 ntBASIC21.31■■□□□ 1
COL1A1P02452 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
COL1A1P02452 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
COL1A1P02452 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC21.31■■□□□ 1
COL1A1P02452 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
COL1A1P02452 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC21.31■■□□□ 1
COL1A1P02452 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
COL1A1P02452 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC21.31■■□□□ 1
COL1A1P02452 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC21.31■■□□□ 1
COL1A1P02452 AL020989.1-201ENST00000422979 469 ntBASIC21.31■■□□□ 1
COL1A1P02452 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC21.31■■□□□ 1
COL1A1P02452 NKTR-203ENST00000442970 646 ntTSL 2 BASIC21.31■■□□□ 1
COL1A1P02452 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC21.31■■□□□ 1
COL1A1P02452 PRYP5-201ENST00000451909 266 ntBASIC21.31■■□□□ 1
COL1A1P02452 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
COL1A1P02452 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
COL1A1P02452 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC21.31■■□□□ 1
COL1A1P02452 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC21.31■■□□□ 1
COL1A1P02452 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
COL1A1P02452 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
COL1A1P02452 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 83.6 ms