Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC14.14□□□□□ -0.15
IFNA1P01562 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
IFNA1P01562 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
IFNA1P01562 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
IFNA1P01562 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
IFNA1P01562 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
IFNA1P01562 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
IFNA1P01562 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC14.14□□□□□ -0.15
IFNA1P01562 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
IFNA1P01562 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
IFNA1P01562 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
IFNA1P01562 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
IFNA1P01562 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
IFNA1P01562 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
IFNA1P01562 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
IFNA1P01562 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
IFNA1P01562 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
IFNA1P01562 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
IFNA1P01562 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
IFNA1P01562 ENSA-205ENST00000361532 792 ntTSL 2 BASIC14.13□□□□□ -0.15
IFNA1P01562 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
IFNA1P01562 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
IFNA1P01562 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
IFNA1P01562 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
IFNA1P01562 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
IFNA1P01562 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC14.13□□□□□ -0.15
IFNA1P01562 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
IFNA1P01562 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
IFNA1P01562 KRT8P41-201ENST00000533985 1514 ntBASIC14.13□□□□□ -0.15
IFNA1P01562 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
IFNA1P01562 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
IFNA1P01562 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC14.13□□□□□ -0.15
IFNA1P01562 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
IFNA1P01562 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
IFNA1P01562 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
IFNA1P01562 AL603756.1-201ENST00000606511 2163 ntBASIC14.13□□□□□ -0.15
IFNA1P01562 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
IFNA1P01562 AL513477.1-201ENST00000602865 2407 ntBASIC14.13□□□□□ -0.15
IFNA1P01562 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
IFNA1P01562 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC14.13□□□□□ -0.15
IFNA1P01562 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC14.13□□□□□ -0.15
IFNA1P01562 PCDHA1-201ENST00000378133 2726 ntBASIC14.13□□□□□ -0.15
IFNA1P01562 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
IFNA1P01562 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
IFNA1P01562 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
IFNA1P01562 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC14.13□□□□□ -0.15
IFNA1P01562 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC14.12□□□□□ -0.15
IFNA1P01562 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
IFNA1P01562 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
IFNA1P01562 AGGF1P2-201ENST00000426656 2106 ntBASIC14.12□□□□□ -0.15
IFNA1P01562 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
IFNA1P01562 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
IFNA1P01562 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
IFNA1P01562 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC14.12□□□□□ -0.15
IFNA1P01562 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC14.12□□□□□ -0.15
IFNA1P01562 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
IFNA1P01562 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
IFNA1P01562 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
IFNA1P01562 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
IFNA1P01562 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
IFNA1P01562 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
IFNA1P01562 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
IFNA1P01562 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
IFNA1P01562 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
IFNA1P01562 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
IFNA1P01562 PRSS44-201ENST00000515154 1146 ntBASIC14.12□□□□□ -0.15
IFNA1P01562 DUX4L16-201ENST00000555130 1264 ntBASIC14.12□□□□□ -0.15
IFNA1P01562 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC14.12□□□□□ -0.15
IFNA1P01562 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC14.12□□□□□ -0.15
IFNA1P01562 HLA-A-209ENST00000638375 975 ntBASIC14.12□□□□□ -0.15
IFNA1P01562 ABR-203ENST00000536794 2213 ntTSL 2 BASIC14.12□□□□□ -0.15
IFNA1P01562 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC14.12□□□□□ -0.15
IFNA1P01562 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC14.12□□□□□ -0.15
IFNA1P01562 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
IFNA1P01562 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
IFNA1P01562 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC14.12□□□□□ -0.15
IFNA1P01562 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
IFNA1P01562 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
IFNA1P01562 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC14.12□□□□□ -0.15
IFNA1P01562 AL596257.1-201ENST00000641463 2694 ntBASIC14.12□□□□□ -0.15
IFNA1P01562 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
IFNA1P01562 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC14.12□□□□□ -0.15
IFNA1P01562 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC14.12□□□□□ -0.15
IFNA1P01562 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
IFNA1P01562 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
IFNA1P01562 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
IFNA1P01562 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
IFNA1P01562 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
IFNA1P01562 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
IFNA1P01562 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
IFNA1P01562 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC14.11□□□□□ -0.15
IFNA1P01562 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
IFNA1P01562 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
IFNA1P01562 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
IFNA1P01562 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
IFNA1P01562 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
IFNA1P01562 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
IFNA1P01562 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
IFNA1P01562 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC14.11□□□□□ -0.15
IFNA1P01562 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC14.11□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms