Protein–RNA interactions for Protein: O96006

ZBED1, Zinc finger BED domain-containing protein 1, humanhuman

Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZBED1O96006 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ZBED1O96006 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ZBED1O96006 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC18.84■□□□□ 0.61
ZBED1O96006 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ZBED1O96006 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
ZBED1O96006 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC18.84■□□□□ 0.61
ZBED1O96006 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
ZBED1O96006 KRT17P6-201ENST00000453795 1220 ntBASIC18.84■□□□□ 0.61
ZBED1O96006 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC18.84■□□□□ 0.61
ZBED1O96006 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC18.84■□□□□ 0.61
ZBED1O96006 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC18.84■□□□□ 0.61
ZBED1O96006 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC18.84■□□□□ 0.61
ZBED1O96006 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC18.84■□□□□ 0.61
ZBED1O96006 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ZBED1O96006 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC18.84■□□□□ 0.61
ZBED1O96006 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC18.84■□□□□ 0.61
ZBED1O96006 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC18.84■□□□□ 0.61
ZBED1O96006 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ZBED1O96006 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC18.84■□□□□ 0.61
ZBED1O96006 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
ZBED1O96006 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC18.84■□□□□ 0.61
ZBED1O96006 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC18.84■□□□□ 0.61
ZBED1O96006 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ZBED1O96006 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
ZBED1O96006 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
ZBED1O96006 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
ZBED1O96006 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
ZBED1O96006 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ZBED1O96006 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ZBED1O96006 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ZBED1O96006 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
ZBED1O96006 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
ZBED1O96006 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC18.83■□□□□ 0.61
ZBED1O96006 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC18.83■□□□□ 0.61
ZBED1O96006 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
ZBED1O96006 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC18.83■□□□□ 0.61
ZBED1O96006 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC18.83■□□□□ 0.61
ZBED1O96006 AP000997.3-201ENST00000623333 2250 ntBASIC18.83■□□□□ 0.61
ZBED1O96006 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
ZBED1O96006 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ZBED1O96006 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
ZBED1O96006 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ZBED1O96006 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
ZBED1O96006 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ZBED1O96006 AC104819.1-201ENST00000504587 486 ntBASIC18.83■□□□□ 0.6
ZBED1O96006 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC18.83■□□□□ 0.6
ZBED1O96006 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
ZBED1O96006 AC074051.2-201ENST00000565115 352 ntBASIC18.83■□□□□ 0.6
ZBED1O96006 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC18.83■□□□□ 0.6
ZBED1O96006 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC18.83■□□□□ 0.6
ZBED1O96006 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ZBED1O96006 GATB-213ENST00000515812 1893 ntTSL 5 BASIC18.83■□□□□ 0.6
ZBED1O96006 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
ZBED1O96006 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
ZBED1O96006 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
ZBED1O96006 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
ZBED1O96006 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ZBED1O96006 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ZBED1O96006 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ZBED1O96006 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
ZBED1O96006 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
ZBED1O96006 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
ZBED1O96006 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
ZBED1O96006 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC18.82■□□□□ 0.6
ZBED1O96006 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
ZBED1O96006 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
ZBED1O96006 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC18.82■□□□□ 0.6
ZBED1O96006 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC18.82■□□□□ 0.6
ZBED1O96006 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ZBED1O96006 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC18.82■□□□□ 0.6
ZBED1O96006 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
ZBED1O96006 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC18.82■□□□□ 0.6
ZBED1O96006 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ZBED1O96006 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ZBED1O96006 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ZBED1O96006 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC18.82■□□□□ 0.6
ZBED1O96006 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC18.82■□□□□ 0.6
ZBED1O96006 IGHV3-47-201ENST00000425060 335 ntBASIC18.82■□□□□ 0.6
ZBED1O96006 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ZBED1O96006 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC18.82■□□□□ 0.6
ZBED1O96006 CLEC4GP1-201ENST00000596555 870 ntBASIC18.82■□□□□ 0.6
ZBED1O96006 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC18.82■□□□□ 0.6
ZBED1O96006 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ZBED1O96006 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
ZBED1O96006 FLJ13224-201ENST00000313737 1514 ntBASIC18.82■□□□□ 0.6
ZBED1O96006 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
ZBED1O96006 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
ZBED1O96006 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ZBED1O96006 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
ZBED1O96006 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC18.82■□□□□ 0.6
ZBED1O96006 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ZBED1O96006 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
ZBED1O96006 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ZBED1O96006 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC18.82■□□□□ 0.6
ZBED1O96006 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ZBED1O96006 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC18.82■□□□□ 0.6
ZBED1O96006 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
ZBED1O96006 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ZBED1O96006 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ZBED1O96006 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms