Protein–RNA interactions for Protein: O95503

CBX6, Chromobox protein homolog 6, humanhuman

Predictions only

Length 412 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX6O95503 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC17.8■□□□□ 0.44
CBX6O95503 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CBX6O95503 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC17.8■□□□□ 0.44
CBX6O95503 AC026271.3-201ENST00000571884 352 ntBASIC17.8■□□□□ 0.44
CBX6O95503 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CBX6O95503 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CBX6O95503 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC17.8■□□□□ 0.44
CBX6O95503 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
CBX6O95503 AL355312.1-201ENST00000407115 2176 ntBASIC17.8■□□□□ 0.44
CBX6O95503 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC17.8■□□□□ 0.44
CBX6O95503 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CBX6O95503 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC17.8■□□□□ 0.44
CBX6O95503 KRT8P3-201ENST00000519669 1449 ntBASIC17.8■□□□□ 0.44
CBX6O95503 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC17.8■□□□□ 0.44
CBX6O95503 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CBX6O95503 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC17.8■□□□□ 0.44
CBX6O95503 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CBX6O95503 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC17.8■□□□□ 0.44
CBX6O95503 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.79■□□□□ 0.44
CBX6O95503 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
CBX6O95503 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
CBX6O95503 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
CBX6O95503 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC17.79■□□□□ 0.44
CBX6O95503 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
CBX6O95503 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC17.79■□□□□ 0.44
CBX6O95503 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC17.79■□□□□ 0.44
CBX6O95503 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CBX6O95503 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CBX6O95503 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC17.79■□□□□ 0.44
CBX6O95503 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC17.79■□□□□ 0.44
CBX6O95503 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CBX6O95503 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CBX6O95503 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC17.79■□□□□ 0.44
CBX6O95503 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC17.79■□□□□ 0.44
CBX6O95503 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
CBX6O95503 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CBX6O95503 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CBX6O95503 CROCCP2-202ENST00000412962 2773 ntBASIC17.79■□□□□ 0.44
CBX6O95503 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CBX6O95503 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CBX6O95503 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CBX6O95503 PRR31-201ENST00000371629 978 ntTSL 2 BASIC17.79■□□□□ 0.44
CBX6O95503 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
CBX6O95503 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
CBX6O95503 AK4P3-201ENST00000418260 669 ntBASIC17.79■□□□□ 0.44
CBX6O95503 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC17.79■□□□□ 0.44
CBX6O95503 UPK3BP1-201ENST00000428678 509 ntBASIC17.79■□□□□ 0.44
CBX6O95503 AC128688.1-201ENST00000487626 519 ntBASIC17.79■□□□□ 0.44
CBX6O95503 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC17.79■□□□□ 0.44
CBX6O95503 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
CBX6O95503 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC17.79■□□□□ 0.44
CBX6O95503 AC091076.1-201ENST00000610741 619 ntBASIC17.79■□□□□ 0.44
CBX6O95503 AL445675.2-201ENST00000620291 557 ntBASIC17.79■□□□□ 0.44
CBX6O95503 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
CBX6O95503 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CBX6O95503 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
CBX6O95503 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CBX6O95503 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC17.79■□□□□ 0.44
CBX6O95503 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CBX6O95503 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
CBX6O95503 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CBX6O95503 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CBX6O95503 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
CBX6O95503 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CBX6O95503 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC17.79■□□□□ 0.44
CBX6O95503 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC17.79■□□□□ 0.44
CBX6O95503 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CBX6O95503 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CBX6O95503 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CBX6O95503 AC099343.3-201ENST00000605834 2503 ntBASIC17.78■□□□□ 0.44
CBX6O95503 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CBX6O95503 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC17.78■□□□□ 0.44
CBX6O95503 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC17.78■□□□□ 0.44
CBX6O95503 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CBX6O95503 LTF-203ENST00000426532 2494 ntTSL 2 BASIC17.78■□□□□ 0.44
CBX6O95503 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CBX6O95503 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC17.78■□□□□ 0.44
CBX6O95503 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CBX6O95503 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CBX6O95503 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC17.78■□□□□ 0.44
CBX6O95503 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CBX6O95503 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CBX6O95503 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
CBX6O95503 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CBX6O95503 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CBX6O95503 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CBX6O95503 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CBX6O95503 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC17.78■□□□□ 0.44
CBX6O95503 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC17.78■□□□□ 0.44
CBX6O95503 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC17.78■□□□□ 0.44
CBX6O95503 AC063952.2-201ENST00000498792 1227 ntBASIC17.78■□□□□ 0.44
CBX6O95503 LINC01238-205ENST00000567549 1107 ntBASIC17.78■□□□□ 0.44
CBX6O95503 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC17.78■□□□□ 0.44
CBX6O95503 DGCR10-201ENST00000609839 495 ntBASIC17.78■□□□□ 0.44
CBX6O95503 AL358472.4-201ENST00000633140 710 ntBASIC17.78■□□□□ 0.44
CBX6O95503 ABBA01031674.1-201ENST00000635145 728 ntBASIC17.78■□□□□ 0.44
CBX6O95503 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC17.78■□□□□ 0.44
CBX6O95503 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CBX6O95503 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CBX6O95503 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms