Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 SIRPAP1-201ENST00000448467 1770 ntBASIC21.24■□□□□ 0.99
MBD4O95243 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
MBD4O95243 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC21.24■□□□□ 0.99
MBD4O95243 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC21.24■□□□□ 0.99
MBD4O95243 ABCD1P5-201ENST00000445663 754 ntBASIC21.24■□□□□ 0.99
MBD4O95243 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC21.24■□□□□ 0.99
MBD4O95243 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
MBD4O95243 AC122714.2-201ENST00000502787 707 ntBASIC21.24■□□□□ 0.99
MBD4O95243 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC21.24■□□□□ 0.99
MBD4O95243 AC106795.1-205ENST00000512851 1056 ntBASIC21.24■□□□□ 0.99
MBD4O95243 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
MBD4O95243 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC21.24■□□□□ 0.99
MBD4O95243 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
MBD4O95243 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
MBD4O95243 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC21.24■□□□□ 0.99
MBD4O95243 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
MBD4O95243 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
MBD4O95243 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
MBD4O95243 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
MBD4O95243 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
MBD4O95243 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
MBD4O95243 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
MBD4O95243 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
MBD4O95243 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
MBD4O95243 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
MBD4O95243 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
MBD4O95243 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
MBD4O95243 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
MBD4O95243 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC21.23■□□□□ 0.99
MBD4O95243 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
MBD4O95243 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC21.23■□□□□ 0.99
MBD4O95243 DDX43P3-201ENST00000441064 443 ntBASIC21.23■□□□□ 0.99
MBD4O95243 AP002469.2-201ENST00000531724 424 ntBASIC21.23■□□□□ 0.99
MBD4O95243 AL160237.2-201ENST00000556165 472 ntBASIC21.23■□□□□ 0.99
MBD4O95243 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC21.23■□□□□ 0.99
MBD4O95243 TMED1-207ENST00000591695 809 ntTSL 5 BASIC21.23■□□□□ 0.99
MBD4O95243 KLK8-205ENST00000593490 267 ntTSL 3 BASIC21.23■□□□□ 0.99
MBD4O95243 AL355877.3-201ENST00000622820 899 ntBASIC21.23■□□□□ 0.99
MBD4O95243 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
MBD4O95243 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
MBD4O95243 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC21.23■□□□□ 0.99
MBD4O95243 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
MBD4O95243 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
MBD4O95243 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
MBD4O95243 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
MBD4O95243 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
MBD4O95243 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC21.23■□□□□ 0.99
MBD4O95243 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
MBD4O95243 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
MBD4O95243 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
MBD4O95243 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
MBD4O95243 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC21.22■□□□□ 0.99
MBD4O95243 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC21.22■□□□□ 0.99
MBD4O95243 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
MBD4O95243 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
MBD4O95243 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
MBD4O95243 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
MBD4O95243 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
MBD4O95243 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
MBD4O95243 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC21.22■□□□□ 0.99
MBD4O95243 CD9-202ENST00000382515 1229 ntTSL 5 BASIC21.22■□□□□ 0.99
MBD4O95243 FGFR3P6-201ENST00000457012 610 ntBASIC21.22■□□□□ 0.99
MBD4O95243 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC21.22■□□□□ 0.99
MBD4O95243 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC21.22■□□□□ 0.99
MBD4O95243 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC21.22■□□□□ 0.99
MBD4O95243 MTDHP3-201ENST00000594186 672 ntBASIC21.22■□□□□ 0.99
MBD4O95243 VPS51-217ENST00000639871 243 ntTSL 5 BASIC21.22■□□□□ 0.99
MBD4O95243 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC21.22■□□□□ 0.99
MBD4O95243 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
MBD4O95243 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
MBD4O95243 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC21.22■□□□□ 0.99
MBD4O95243 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC21.22■□□□□ 0.99
MBD4O95243 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC21.21■□□□□ 0.99
MBD4O95243 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC21.21■□□□□ 0.99
MBD4O95243 KRT8P10-201ENST00000450021 1447 ntBASIC21.21■□□□□ 0.99
MBD4O95243 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC21.21■□□□□ 0.99
MBD4O95243 AP005117.1-201ENST00000584346 1413 ntBASIC21.21■□□□□ 0.99
MBD4O95243 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
MBD4O95243 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
MBD4O95243 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
MBD4O95243 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
MBD4O95243 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
MBD4O95243 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
MBD4O95243 RBM17P3-201ENST00000417687 1192 ntBASIC21.21■□□□□ 0.99
MBD4O95243 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC21.21■□□□□ 0.99
MBD4O95243 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC21.21■□□□□ 0.99
MBD4O95243 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC21.21■□□□□ 0.99
MBD4O95243 CALM3-211ENST00000598871 561 ntTSL 4 BASIC21.21■□□□□ 0.99
MBD4O95243 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC21.21■□□□□ 0.99
MBD4O95243 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC21.21■□□□□ 0.99
MBD4O95243 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
MBD4O95243 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
MBD4O95243 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
MBD4O95243 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
MBD4O95243 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC21.21■□□□□ 0.99
MBD4O95243 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC21.21■□□□□ 0.99
MBD4O95243 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC21.21■□□□□ 0.99
MBD4O95243 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
MBD4O95243 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC21.21■□□□□ 0.99
MBD4O95243 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC21.21■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms