Protein–RNA interactions for Protein: O95170

CDRT1, CMT1A duplicated region transcript 1 protein, humanhuman

Predictions only

Length 752 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1O95170 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC15.94■□□□□ 0.14
CDRT1O95170 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CDRT1O95170 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CDRT1O95170 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
CDRT1O95170 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CDRT1O95170 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
CDRT1O95170 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CDRT1O95170 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
CDRT1O95170 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CDRT1O95170 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CDRT1O95170 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CDRT1O95170 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CDRT1O95170 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CDRT1O95170 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
CDRT1O95170 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CDRT1O95170 KSR1P1-201ENST00000446298 240 ntBASIC15.93■□□□□ 0.14
CDRT1O95170 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CDRT1O95170 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC15.93■□□□□ 0.14
CDRT1O95170 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC15.93■□□□□ 0.14
CDRT1O95170 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CDRT1O95170 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC15.93■□□□□ 0.14
CDRT1O95170 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC15.93■□□□□ 0.14
CDRT1O95170 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CDRT1O95170 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CDRT1O95170 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CDRT1O95170 KRT8P50-201ENST00000562022 1438 ntBASIC15.93■□□□□ 0.14
CDRT1O95170 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CDRT1O95170 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC15.93■□□□□ 0.14
CDRT1O95170 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CDRT1O95170 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CDRT1O95170 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CDRT1O95170 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
CDRT1O95170 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
CDRT1O95170 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
CDRT1O95170 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CDRT1O95170 SDHAP2-201ENST00000455183 2001 ntBASIC15.92■□□□□ 0.14
CDRT1O95170 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC15.92■□□□□ 0.14
CDRT1O95170 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
CDRT1O95170 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC15.92■□□□□ 0.14
CDRT1O95170 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
CDRT1O95170 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC15.92■□□□□ 0.14
CDRT1O95170 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC15.92■□□□□ 0.14
CDRT1O95170 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CDRT1O95170 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC15.92■□□□□ 0.14
CDRT1O95170 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC15.92■□□□□ 0.14
CDRT1O95170 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CDRT1O95170 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CDRT1O95170 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC15.92■□□□□ 0.14
CDRT1O95170 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
CDRT1O95170 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CDRT1O95170 MIR564-202ENST00000385049 94 ntBASIC15.92■□□□□ 0.14
CDRT1O95170 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC15.92■□□□□ 0.14
CDRT1O95170 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
CDRT1O95170 ADM-205ENST00000528544 586 ntTSL 2 BASIC15.92■□□□□ 0.14
CDRT1O95170 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CDRT1O95170 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC15.92■□□□□ 0.14
CDRT1O95170 AL353708.3-201ENST00000610272 989 ntBASIC15.92■□□□□ 0.14
CDRT1O95170 AC011298.2-201ENST00000617989 482 ntBASIC15.92■□□□□ 0.14
CDRT1O95170 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
CDRT1O95170 CR392000.1-201ENST00000624770 1228 ntBASIC15.92■□□□□ 0.14
CDRT1O95170 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC15.92■□□□□ 0.14
CDRT1O95170 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC15.92■□□□□ 0.14
CDRT1O95170 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CDRT1O95170 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
CDRT1O95170 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
CDRT1O95170 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC15.92■□□□□ 0.14
CDRT1O95170 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
CDRT1O95170 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CDRT1O95170 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
CDRT1O95170 KRT16P1-201ENST00000399124 1418 ntBASIC15.92■□□□□ 0.14
CDRT1O95170 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CDRT1O95170 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC15.92■□□□□ 0.14
CDRT1O95170 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
CDRT1O95170 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
CDRT1O95170 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CDRT1O95170 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CDRT1O95170 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CDRT1O95170 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CDRT1O95170 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC15.91■□□□□ 0.14
CDRT1O95170 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CDRT1O95170 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
CDRT1O95170 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC15.91■□□□□ 0.14
CDRT1O95170 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
CDRT1O95170 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CDRT1O95170 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CDRT1O95170 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CDRT1O95170 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CDRT1O95170 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CDRT1O95170 AC008741.2-201ENST00000612792 3115 ntBASIC15.91■□□□□ 0.14
CDRT1O95170 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CDRT1O95170 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CDRT1O95170 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CDRT1O95170 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CDRT1O95170 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
CDRT1O95170 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC15.91■□□□□ 0.14
CDRT1O95170 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC15.91■□□□□ 0.14
CDRT1O95170 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
CDRT1O95170 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC15.91■□□□□ 0.14
CDRT1O95170 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
CDRT1O95170 AC008040.2-201ENST00000461049 708 ntBASIC15.91■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms