Protein–RNA interactions for Protein: O95167

NDUFA3, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 3, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA3O95167 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
NDUFA3O95167 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC14.27□□□□□ -0.13
NDUFA3O95167 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
NDUFA3O95167 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NDUFA3O95167 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
NDUFA3O95167 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NDUFA3O95167 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NDUFA3O95167 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
NDUFA3O95167 CD276-203ENST00000537340 2439 ntTSL 2 BASIC14.26□□□□□ -0.13
NDUFA3O95167 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC14.26□□□□□ -0.13
NDUFA3O95167 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NDUFA3O95167 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC14.26□□□□□ -0.13
NDUFA3O95167 MED29-202ENST00000594368 1471 ntTSL 2 BASIC14.26□□□□□ -0.13
NDUFA3O95167 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
NDUFA3O95167 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
NDUFA3O95167 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
NDUFA3O95167 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC14.26□□□□□ -0.13
NDUFA3O95167 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC14.26□□□□□ -0.13
NDUFA3O95167 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
NDUFA3O95167 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC14.26□□□□□ -0.13
NDUFA3O95167 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC14.26□□□□□ -0.13
NDUFA3O95167 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC14.26□□□□□ -0.13
NDUFA3O95167 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NDUFA3O95167 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NDUFA3O95167 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NDUFA3O95167 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC14.26□□□□□ -0.13
NDUFA3O95167 FXN-203ENST00000396366 922 ntTSL 2 BASIC14.26□□□□□ -0.13
NDUFA3O95167 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NDUFA3O95167 PCED1CP-201ENST00000419887 785 ntBASIC14.26□□□□□ -0.13
NDUFA3O95167 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NDUFA3O95167 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC14.26□□□□□ -0.13
NDUFA3O95167 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NDUFA3O95167 KRT18P35-201ENST00000510488 1269 ntBASIC14.26□□□□□ -0.13
NDUFA3O95167 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
NDUFA3O95167 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC14.26□□□□□ -0.13
NDUFA3O95167 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NDUFA3O95167 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC14.26□□□□□ -0.13
NDUFA3O95167 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC14.26□□□□□ -0.13
NDUFA3O95167 AL121672.3-201ENST00000608644 468 ntBASIC14.26□□□□□ -0.13
NDUFA3O95167 AL592071.1-201ENST00000611956 408 ntBASIC14.26□□□□□ -0.13
NDUFA3O95167 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC14.26□□□□□ -0.13
NDUFA3O95167 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC14.26□□□□□ -0.13
NDUFA3O95167 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
NDUFA3O95167 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NDUFA3O95167 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NDUFA3O95167 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
NDUFA3O95167 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC14.26□□□□□ -0.13
NDUFA3O95167 GNE-204ENST00000539208 2190 ntTSL 2 BASIC14.26□□□□□ -0.13
NDUFA3O95167 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NDUFA3O95167 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
NDUFA3O95167 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NDUFA3O95167 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
NDUFA3O95167 LTB4R2-202ENST00000528054 3092 ntBASIC14.26□□□□□ -0.13
NDUFA3O95167 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NDUFA3O95167 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NDUFA3O95167 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
NDUFA3O95167 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NDUFA3O95167 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NDUFA3O95167 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
NDUFA3O95167 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NDUFA3O95167 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NDUFA3O95167 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC14.25□□□□□ -0.13
NDUFA3O95167 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
NDUFA3O95167 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
NDUFA3O95167 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
NDUFA3O95167 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NDUFA3O95167 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC14.25□□□□□ -0.13
NDUFA3O95167 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NDUFA3O95167 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
NDUFA3O95167 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC14.25□□□□□ -0.13
NDUFA3O95167 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NDUFA3O95167 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
NDUFA3O95167 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NDUFA3O95167 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC14.25□□□□□ -0.13
NDUFA3O95167 AC134043.2-201ENST00000624206 2238 ntBASIC14.25□□□□□ -0.13
NDUFA3O95167 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
NDUFA3O95167 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NDUFA3O95167 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
NDUFA3O95167 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NDUFA3O95167 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NDUFA3O95167 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NDUFA3O95167 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NDUFA3O95167 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NDUFA3O95167 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NDUFA3O95167 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NDUFA3O95167 NME9-203ENST00000383180 2133 ntTSL 2 BASIC14.25□□□□□ -0.13
NDUFA3O95167 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC14.25□□□□□ -0.13
NDUFA3O95167 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC14.25□□□□□ -0.13
NDUFA3O95167 BX276092.5-203ENST00000456199 560 ntBASIC14.25□□□□□ -0.13
NDUFA3O95167 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NDUFA3O95167 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC14.25□□□□□ -0.13
NDUFA3O95167 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
NDUFA3O95167 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NDUFA3O95167 AL353801.3-201ENST00000609898 542 ntBASIC14.25□□□□□ -0.13
NDUFA3O95167 AC010331.1-201ENST00000611423 582 ntBASIC14.25□□□□□ -0.13
NDUFA3O95167 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC14.25□□□□□ -0.13
NDUFA3O95167 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC14.25□□□□□ -0.13
NDUFA3O95167 AL133373.2-201ENST00000623187 2828 ntBASIC14.25□□□□□ -0.13
NDUFA3O95167 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
NDUFA3O95167 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms