Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ZNF253O75346 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
ZNF253O75346 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ZNF253O75346 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
ZNF253O75346 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
ZNF253O75346 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ZNF253O75346 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ZNF253O75346 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC13.92□□□□□ -0.18
ZNF253O75346 HOXB1-202ENST00000577092 1414 ntBASIC13.92□□□□□ -0.18
ZNF253O75346 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ZNF253O75346 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
ZNF253O75346 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC13.92□□□□□ -0.18
ZNF253O75346 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
ZNF253O75346 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
ZNF253O75346 PHGDH-209ENST00000641074 1780 ntBASIC13.92□□□□□ -0.18
ZNF253O75346 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC13.92□□□□□ -0.18
ZNF253O75346 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
ZNF253O75346 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ZNF253O75346 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ZNF253O75346 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ZNF253O75346 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
ZNF253O75346 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ZNF253O75346 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
ZNF253O75346 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC13.92□□□□□ -0.18
ZNF253O75346 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC13.92□□□□□ -0.18
ZNF253O75346 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
ZNF253O75346 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC13.92□□□□□ -0.18
ZNF253O75346 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
ZNF253O75346 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
ZNF253O75346 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
ZNF253O75346 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
ZNF253O75346 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC13.92□□□□□ -0.18
ZNF253O75346 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ZNF253O75346 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
ZNF253O75346 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ZNF253O75346 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC13.92□□□□□ -0.18
ZNF253O75346 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
ZNF253O75346 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC13.92□□□□□ -0.18
ZNF253O75346 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
ZNF253O75346 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
ZNF253O75346 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ZNF253O75346 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ZNF253O75346 SRI-203ENST00000419179 1307 ntTSL 2 BASIC13.91□□□□□ -0.18
ZNF253O75346 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
ZNF253O75346 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
ZNF253O75346 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
ZNF253O75346 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ZNF253O75346 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
ZNF253O75346 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
ZNF253O75346 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC13.91□□□□□ -0.18
ZNF253O75346 CYP51A1P1-201ENST00000492267 1507 ntBASIC13.91□□□□□ -0.18
ZNF253O75346 AL163051.1-201ENST00000569214 1512 ntBASIC13.91□□□□□ -0.18
ZNF253O75346 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC13.91□□□□□ -0.18
ZNF253O75346 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
ZNF253O75346 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC13.91□□□□□ -0.18
ZNF253O75346 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ZNF253O75346 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC13.91□□□□□ -0.18
ZNF253O75346 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ZNF253O75346 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
ZNF253O75346 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ZNF253O75346 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC13.91□□□□□ -0.18
ZNF253O75346 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
ZNF253O75346 MFAP1P1-201ENST00000442257 1255 ntBASIC13.91□□□□□ -0.18
ZNF253O75346 AC116562.2-201ENST00000507042 360 ntBASIC13.91□□□□□ -0.18
ZNF253O75346 IRX5-204ENST00000560154 879 ntTSL 5 BASIC13.91□□□□□ -0.18
ZNF253O75346 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
ZNF253O75346 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
ZNF253O75346 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC13.91□□□□□ -0.18
ZNF253O75346 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC13.91□□□□□ -0.18
ZNF253O75346 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
ZNF253O75346 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ZNF253O75346 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
ZNF253O75346 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
ZNF253O75346 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
ZNF253O75346 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
ZNF253O75346 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC13.91□□□□□ -0.18
ZNF253O75346 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
ZNF253O75346 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
ZNF253O75346 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC13.91□□□□□ -0.18
ZNF253O75346 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
ZNF253O75346 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC13.9□□□□□ -0.18
ZNF253O75346 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
ZNF253O75346 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
ZNF253O75346 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
ZNF253O75346 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
ZNF253O75346 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
ZNF253O75346 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
ZNF253O75346 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
ZNF253O75346 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
ZNF253O75346 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
ZNF253O75346 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
ZNF253O75346 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC13.9□□□□□ -0.18
ZNF253O75346 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC13.9□□□□□ -0.18
ZNF253O75346 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC13.9□□□□□ -0.18
ZNF253O75346 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
ZNF253O75346 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC13.9□□□□□ -0.18
ZNF253O75346 MMD2-204ENST00000612910 778 ntTSL 5 BASIC13.9□□□□□ -0.18
ZNF253O75346 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC13.9□□□□□ -0.18
ZNF253O75346 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
ZNF253O75346 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms