Protein–RNA interactions for Protein: O43933

PEX1, Peroxisome biogenesis factor 1, humanhuman

Predictions only

Length 1,283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1O43933 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
PEX1O43933 AK4P3-201ENST00000418260 669 ntBASIC17.41■□□□□ 0.38
PEX1O43933 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
PEX1O43933 AP003041.3-201ENST00000527151 707 ntBASIC17.41■□□□□ 0.38
PEX1O43933 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC17.41■□□□□ 0.38
PEX1O43933 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC17.41■□□□□ 0.38
PEX1O43933 AL512604.3-201ENST00000569583 964 ntBASIC17.41■□□□□ 0.38
PEX1O43933 AL138966.2-201ENST00000621997 464 ntBASIC17.41■□□□□ 0.38
PEX1O43933 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
PEX1O43933 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
PEX1O43933 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
PEX1O43933 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PEX1O43933 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
PEX1O43933 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC17.41■□□□□ 0.38
PEX1O43933 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC17.41■□□□□ 0.38
PEX1O43933 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC17.41■□□□□ 0.38
PEX1O43933 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC17.41■□□□□ 0.38
PEX1O43933 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
PEX1O43933 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PEX1O43933 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PEX1O43933 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PEX1O43933 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PEX1O43933 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC17.4■□□□□ 0.38
PEX1O43933 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC17.4■□□□□ 0.38
PEX1O43933 KRT8P45-201ENST00000414328 1447 ntBASIC17.4■□□□□ 0.38
PEX1O43933 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PEX1O43933 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
PEX1O43933 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PEX1O43933 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PEX1O43933 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PEX1O43933 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PEX1O43933 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
PEX1O43933 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
PEX1O43933 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
PEX1O43933 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
PEX1O43933 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
PEX1O43933 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC17.4■□□□□ 0.38
PEX1O43933 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
PEX1O43933 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC17.4■□□□□ 0.38
PEX1O43933 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC17.4■□□□□ 0.38
PEX1O43933 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
PEX1O43933 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PEX1O43933 AC068587.9-201ENST00000641814 219 ntBASIC17.4■□□□□ 0.38
PEX1O43933 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC17.4■□□□□ 0.38
PEX1O43933 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PEX1O43933 AC011270.2-201ENST00000624293 2550 ntBASIC17.4■□□□□ 0.38
PEX1O43933 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC17.4■□□□□ 0.38
PEX1O43933 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
PEX1O43933 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC17.4■□□□□ 0.38
PEX1O43933 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
PEX1O43933 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
PEX1O43933 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PEX1O43933 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC17.4■□□□□ 0.38
PEX1O43933 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC17.4■□□□□ 0.38
PEX1O43933 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PEX1O43933 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PEX1O43933 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
PEX1O43933 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
PEX1O43933 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
PEX1O43933 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
PEX1O43933 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
PEX1O43933 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC17.39■□□□□ 0.37
PEX1O43933 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
PEX1O43933 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PEX1O43933 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PEX1O43933 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
PEX1O43933 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC17.39■□□□□ 0.37
PEX1O43933 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC17.39■□□□□ 0.37
PEX1O43933 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.37
PEX1O43933 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PEX1O43933 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PEX1O43933 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC17.39■□□□□ 0.37
PEX1O43933 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PEX1O43933 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC17.39■□□□□ 0.37
PEX1O43933 NTF6B-201ENST00000591913 560 ntBASIC17.39■□□□□ 0.37
PEX1O43933 AC139887.4-201ENST00000607877 719 ntBASIC17.39■□□□□ 0.37
PEX1O43933 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
PEX1O43933 AC141257.4-201ENST00000634557 245 ntBASIC17.39■□□□□ 0.37
PEX1O43933 AC136944.6-201ENST00000634818 245 ntBASIC17.39■□□□□ 0.37
PEX1O43933 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
PEX1O43933 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PEX1O43933 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC17.39■□□□□ 0.37
PEX1O43933 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PEX1O43933 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PEX1O43933 NME9-203ENST00000383180 2133 ntTSL 2 BASIC17.39■□□□□ 0.37
PEX1O43933 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.37
PEX1O43933 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PEX1O43933 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
PEX1O43933 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC17.39■□□□□ 0.37
PEX1O43933 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PEX1O43933 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PEX1O43933 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PEX1O43933 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PEX1O43933 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
PEX1O43933 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PEX1O43933 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PEX1O43933 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
PEX1O43933 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PEX1O43933 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PEX1O43933 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms