Protein–RNA interactions for Protein: O43181

NDUFS4, NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial, humanhuman

Predictions only

Length 175 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS4O43181 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
NDUFS4O43181 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NDUFS4O43181 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
NDUFS4O43181 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NDUFS4O43181 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC17.09■□□□□ 0.33
NDUFS4O43181 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
NDUFS4O43181 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC17.09■□□□□ 0.33
NDUFS4O43181 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
NDUFS4O43181 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NDUFS4O43181 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
NDUFS4O43181 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC17.08■□□□□ 0.33
NDUFS4O43181 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
NDUFS4O43181 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
NDUFS4O43181 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
NDUFS4O43181 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC17.08■□□□□ 0.33
NDUFS4O43181 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
NDUFS4O43181 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
NDUFS4O43181 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC17.08■□□□□ 0.33
NDUFS4O43181 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC17.08■□□□□ 0.33
NDUFS4O43181 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
NDUFS4O43181 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
NDUFS4O43181 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
NDUFS4O43181 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC17.08■□□□□ 0.32
NDUFS4O43181 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.32
NDUFS4O43181 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
NDUFS4O43181 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
NDUFS4O43181 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
NDUFS4O43181 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NDUFS4O43181 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NDUFS4O43181 AR-207ENST00000612010 3896 ntTSL 5 BASIC17.08■□□□□ 0.32
NDUFS4O43181 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NDUFS4O43181 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NDUFS4O43181 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
NDUFS4O43181 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC17.08■□□□□ 0.32
NDUFS4O43181 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
NDUFS4O43181 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC17.08■□□□□ 0.32
NDUFS4O43181 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC17.08■□□□□ 0.32
NDUFS4O43181 IL11-204ENST00000590625 1028 ntTSL 2 BASIC17.08■□□□□ 0.32
NDUFS4O43181 NPAP1P7-201ENST00000613027 823 ntBASIC17.08■□□□□ 0.32
NDUFS4O43181 AC116407.2-201ENST00000613639 860 ntBASIC17.08■□□□□ 0.32
NDUFS4O43181 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NDUFS4O43181 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
NDUFS4O43181 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
NDUFS4O43181 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC17.08■□□□□ 0.32
NDUFS4O43181 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.08■□□□□ 0.32
NDUFS4O43181 NME9-203ENST00000383180 2133 ntTSL 2 BASIC17.08■□□□□ 0.32
NDUFS4O43181 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC17.08■□□□□ 0.32
NDUFS4O43181 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NDUFS4O43181 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NDUFS4O43181 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
NDUFS4O43181 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NDUFS4O43181 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
NDUFS4O43181 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NDUFS4O43181 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
NDUFS4O43181 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NDUFS4O43181 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NDUFS4O43181 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NDUFS4O43181 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
NDUFS4O43181 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NDUFS4O43181 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NDUFS4O43181 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NDUFS4O43181 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NDUFS4O43181 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NDUFS4O43181 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
NDUFS4O43181 ATP5G2P1-201ENST00000433580 426 ntBASIC17.07■□□□□ 0.32
NDUFS4O43181 DRAXINP1-201ENST00000437611 948 ntBASIC17.07■□□□□ 0.32
NDUFS4O43181 LINC00265-3P-201ENST00000447588 903 ntBASIC17.07■□□□□ 0.32
NDUFS4O43181 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC17.07■□□□□ 0.32
NDUFS4O43181 TOB2P1-201ENST00000469761 992 ntBASIC17.07■□□□□ 0.32
NDUFS4O43181 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
NDUFS4O43181 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC17.07■□□□□ 0.32
NDUFS4O43181 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
NDUFS4O43181 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC17.07■□□□□ 0.32
NDUFS4O43181 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
NDUFS4O43181 CIB2-208ENST00000560618 804 ntTSL 2 BASIC17.07■□□□□ 0.32
NDUFS4O43181 TPSP2-201ENST00000561760 610 ntBASIC17.07■□□□□ 0.32
NDUFS4O43181 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC17.07■□□□□ 0.32
NDUFS4O43181 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
NDUFS4O43181 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NDUFS4O43181 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
NDUFS4O43181 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
NDUFS4O43181 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NDUFS4O43181 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NDUFS4O43181 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NDUFS4O43181 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC17.07■□□□□ 0.32
NDUFS4O43181 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
NDUFS4O43181 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
NDUFS4O43181 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NDUFS4O43181 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NDUFS4O43181 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
NDUFS4O43181 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
NDUFS4O43181 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
NDUFS4O43181 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NDUFS4O43181 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NDUFS4O43181 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NDUFS4O43181 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
NDUFS4O43181 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
NDUFS4O43181 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
NDUFS4O43181 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
NDUFS4O43181 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms