Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ATP2A1O14983 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ATP2A1O14983 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
ATP2A1O14983 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ATP2A1O14983 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ATP2A1O14983 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
ATP2A1O14983 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC20.34■□□□□ 0.85
ATP2A1O14983 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
ATP2A1O14983 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ATP2A1O14983 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ATP2A1O14983 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ATP2A1O14983 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC20.33■□□□□ 0.85
ATP2A1O14983 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ATP2A1O14983 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC20.33■□□□□ 0.85
ATP2A1O14983 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC20.33■□□□□ 0.85
ATP2A1O14983 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
ATP2A1O14983 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
ATP2A1O14983 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
ATP2A1O14983 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ATP2A1O14983 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ATP2A1O14983 AP000974.1-201ENST00000623909 2387 ntBASIC20.33■□□□□ 0.85
ATP2A1O14983 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC20.33■□□□□ 0.85
ATP2A1O14983 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC20.33■□□□□ 0.85
ATP2A1O14983 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
ATP2A1O14983 RPS29-206ENST00000557111 488 ntTSL 2 BASIC20.33■□□□□ 0.85
ATP2A1O14983 ETFA-208ENST00000559602 792 ntTSL 3 BASIC20.33■□□□□ 0.85
ATP2A1O14983 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ATP2A1O14983 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ATP2A1O14983 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC20.33■□□□□ 0.85
ATP2A1O14983 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
ATP2A1O14983 AC073592.5-201ENST00000624854 528 ntBASIC20.33■□□□□ 0.85
ATP2A1O14983 ADM-208ENST00000534464 1640 ntTSL 2 BASIC20.33■□□□□ 0.84
ATP2A1O14983 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
ATP2A1O14983 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
ATP2A1O14983 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
ATP2A1O14983 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
ATP2A1O14983 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC20.33■□□□□ 0.84
ATP2A1O14983 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
ATP2A1O14983 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC20.33■□□□□ 0.84
ATP2A1O14983 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
ATP2A1O14983 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
ATP2A1O14983 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC20.32■□□□□ 0.84
ATP2A1O14983 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ATP2A1O14983 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC20.32■□□□□ 0.84
ATP2A1O14983 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
ATP2A1O14983 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
ATP2A1O14983 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ATP2A1O14983 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ATP2A1O14983 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ATP2A1O14983 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC20.32■□□□□ 0.84
ATP2A1O14983 AC073621.1-201ENST00000392730 636 ntBASIC20.32■□□□□ 0.84
ATP2A1O14983 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC20.32■□□□□ 0.84
ATP2A1O14983 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC20.32■□□□□ 0.84
ATP2A1O14983 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC20.32■□□□□ 0.84
ATP2A1O14983 UNC93B6-202ENST00000528242 690 ntBASIC20.32■□□□□ 0.84
ATP2A1O14983 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC20.32■□□□□ 0.84
ATP2A1O14983 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC20.32■□□□□ 0.84
ATP2A1O14983 AC006557.2-201ENST00000592985 1240 ntBASIC20.32■□□□□ 0.84
ATP2A1O14983 AC140113.2-201ENST00000604370 208 ntBASIC20.32■□□□□ 0.84
ATP2A1O14983 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ATP2A1O14983 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
ATP2A1O14983 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
ATP2A1O14983 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC20.32■□□□□ 0.84
ATP2A1O14983 POR-209ENST00000439269 1858 ntTSL 2 BASIC20.32■□□□□ 0.84
ATP2A1O14983 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
ATP2A1O14983 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC20.32■□□□□ 0.84
ATP2A1O14983 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
ATP2A1O14983 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC20.31■□□□□ 0.84
ATP2A1O14983 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC20.31■□□□□ 0.84
ATP2A1O14983 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ATP2A1O14983 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ATP2A1O14983 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ATP2A1O14983 AC020763.4-201ENST00000623414 4170 ntBASIC20.31■□□□□ 0.84
ATP2A1O14983 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ATP2A1O14983 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ATP2A1O14983 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC20.31■□□□□ 0.84
ATP2A1O14983 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC20.31■□□□□ 0.84
ATP2A1O14983 WIZP1-201ENST00000531444 2299 ntBASIC20.31■□□□□ 0.84
ATP2A1O14983 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ATP2A1O14983 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ATP2A1O14983 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
ATP2A1O14983 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC20.31■□□□□ 0.84
ATP2A1O14983 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC20.31■□□□□ 0.84
ATP2A1O14983 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC20.31■□□□□ 0.84
ATP2A1O14983 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
ATP2A1O14983 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC20.31■□□□□ 0.84
ATP2A1O14983 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ATP2A1O14983 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ATP2A1O14983 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ATP2A1O14983 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC20.31■□□□□ 0.84
ATP2A1O14983 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ATP2A1O14983 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
ATP2A1O14983 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ATP2A1O14983 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
ATP2A1O14983 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC20.31■□□□□ 0.84
ATP2A1O14983 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ATP2A1O14983 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ATP2A1O14983 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
ATP2A1O14983 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
ATP2A1O14983 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms