Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
FOXN3O00409 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC19.09■□□□□ 0.65
FOXN3O00409 NDUFV2-AS1-203ENST00000608008 779 ntBASIC19.09■□□□□ 0.65
FOXN3O00409 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
FOXN3O00409 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
FOXN3O00409 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
FOXN3O00409 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
FOXN3O00409 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
FOXN3O00409 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
FOXN3O00409 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
FOXN3O00409 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC19.09■□□□□ 0.65
FOXN3O00409 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
FOXN3O00409 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
FOXN3O00409 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
FOXN3O00409 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
FOXN3O00409 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC19.08■□□□□ 0.65
FOXN3O00409 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
FOXN3O00409 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
FOXN3O00409 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
FOXN3O00409 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
FOXN3O00409 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC19.08■□□□□ 0.65
FOXN3O00409 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
FOXN3O00409 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
FOXN3O00409 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
FOXN3O00409 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
FOXN3O00409 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC19.08■□□□□ 0.65
FOXN3O00409 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC19.08■□□□□ 0.65
FOXN3O00409 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
FOXN3O00409 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
FOXN3O00409 AL645929.1-201ENST00000420084 975 ntBASIC19.08■□□□□ 0.64
FOXN3O00409 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC19.08■□□□□ 0.64
FOXN3O00409 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
FOXN3O00409 MED25-212ENST00000618715 1467 ntTSL 5 BASIC19.08■□□□□ 0.64
FOXN3O00409 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC19.08■□□□□ 0.64
FOXN3O00409 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC19.08■□□□□ 0.64
FOXN3O00409 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
FOXN3O00409 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
FOXN3O00409 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.64
FOXN3O00409 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
FOXN3O00409 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
FOXN3O00409 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
FOXN3O00409 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
FOXN3O00409 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
FOXN3O00409 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
FOXN3O00409 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
FOXN3O00409 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
FOXN3O00409 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
FOXN3O00409 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
FOXN3O00409 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
FOXN3O00409 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
FOXN3O00409 BAALC-202ENST00000306391 243 ntTSL 5 BASIC19.07■□□□□ 0.64
FOXN3O00409 BAALC-204ENST00000330955 222 ntTSL 5 BASIC19.07■□□□□ 0.64
FOXN3O00409 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
FOXN3O00409 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC19.07■□□□□ 0.64
FOXN3O00409 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC19.07■□□□□ 0.64
FOXN3O00409 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC19.07■□□□□ 0.64
FOXN3O00409 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
FOXN3O00409 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC19.07■□□□□ 0.64
FOXN3O00409 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC19.07■□□□□ 0.64
FOXN3O00409 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC19.07■□□□□ 0.64
FOXN3O00409 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
FOXN3O00409 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
FOXN3O00409 BANP-227ENST00000626016 2144 ntTSL 2 BASIC19.07■□□□□ 0.64
FOXN3O00409 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
FOXN3O00409 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
FOXN3O00409 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
FOXN3O00409 HLA-J-201ENST00000462773 1622 ntBASIC19.07■□□□□ 0.64
FOXN3O00409 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
FOXN3O00409 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC19.07■□□□□ 0.64
FOXN3O00409 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
FOXN3O00409 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC19.06■□□□□ 0.64
FOXN3O00409 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
FOXN3O00409 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
FOXN3O00409 BOC-212ENST00000485230 2173 ntTSL 2 BASIC19.06■□□□□ 0.64
FOXN3O00409 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
FOXN3O00409 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
FOXN3O00409 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
FOXN3O00409 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
FOXN3O00409 AL031133.1-201ENST00000406807 723 ntBASIC19.06■□□□□ 0.64
FOXN3O00409 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
FOXN3O00409 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC19.06■□□□□ 0.64
FOXN3O00409 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
FOXN3O00409 AL136038.3-201ENST00000561909 1096 ntBASIC19.06■□□□□ 0.64
FOXN3O00409 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC19.06■□□□□ 0.64
FOXN3O00409 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC19.06■□□□□ 0.64
FOXN3O00409 LINC01451-201ENST00000623792 534 ntBASIC19.06■□□□□ 0.64
FOXN3O00409 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
FOXN3O00409 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
FOXN3O00409 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
FOXN3O00409 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
FOXN3O00409 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
FOXN3O00409 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC19.05■□□□□ 0.64
FOXN3O00409 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
FOXN3O00409 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
FOXN3O00409 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
FOXN3O00409 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC19.05■□□□□ 0.64
FOXN3O00409 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
FOXN3O00409 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
FOXN3O00409 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
FOXN3O00409 TSPY22P-201ENST00000427496 604 ntBASIC19.05■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms