Protein–RNA interactions for Protein: A6NLX3

SPDYE4, Speedy protein E4, humanhuman

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDYE4A6NLX3 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
SPDYE4A6NLX3 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
SPDYE4A6NLX3 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SPDYE4A6NLX3 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
SPDYE4A6NLX3 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SPDYE4A6NLX3 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
SPDYE4A6NLX3 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
SPDYE4A6NLX3 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SPDYE4A6NLX3 PCDH8P1-201ENST00000428983 2773 ntBASIC20.19■□□□□ 0.82
SPDYE4A6NLX3 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SPDYE4A6NLX3 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
SPDYE4A6NLX3 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SPDYE4A6NLX3 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SPDYE4A6NLX3 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SPDYE4A6NLX3 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC20.19■□□□□ 0.82
SPDYE4A6NLX3 AL596257.1-201ENST00000641463 2694 ntBASIC20.19■□□□□ 0.82
SPDYE4A6NLX3 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC20.19■□□□□ 0.82
SPDYE4A6NLX3 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SPDYE4A6NLX3 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
SPDYE4A6NLX3 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC20.19■□□□□ 0.82
SPDYE4A6NLX3 AL450487.1-201ENST00000426799 995 ntBASIC20.19■□□□□ 0.82
SPDYE4A6NLX3 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SPDYE4A6NLX3 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC20.19■□□□□ 0.82
SPDYE4A6NLX3 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC20.19■□□□□ 0.82
SPDYE4A6NLX3 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC20.19■□□□□ 0.82
SPDYE4A6NLX3 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC20.19■□□□□ 0.82
SPDYE4A6NLX3 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC20.19■□□□□ 0.82
SPDYE4A6NLX3 NDUFV2-AS1-203ENST00000608008 779 ntBASIC20.19■□□□□ 0.82
SPDYE4A6NLX3 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC20.19■□□□□ 0.82
SPDYE4A6NLX3 CLN6-214ENST00000636314 442 ntTSL 3 BASIC20.19■□□□□ 0.82
SPDYE4A6NLX3 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC20.19■□□□□ 0.82
SPDYE4A6NLX3 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC20.19■□□□□ 0.82
SPDYE4A6NLX3 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
SPDYE4A6NLX3 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SPDYE4A6NLX3 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SPDYE4A6NLX3 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SPDYE4A6NLX3 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SPDYE4A6NLX3 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SPDYE4A6NLX3 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC20.19■□□□□ 0.82
SPDYE4A6NLX3 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SPDYE4A6NLX3 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC20.19■□□□□ 0.82
SPDYE4A6NLX3 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
SPDYE4A6NLX3 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
SPDYE4A6NLX3 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SPDYE4A6NLX3 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SPDYE4A6NLX3 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC20.19■□□□□ 0.82
SPDYE4A6NLX3 TEX21P-204ENST00000641479 1693 ntBASIC20.19■□□□□ 0.82
SPDYE4A6NLX3 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SPDYE4A6NLX3 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
SPDYE4A6NLX3 AC011676.5-201ENST00000624864 2660 ntBASIC20.19■□□□□ 0.82
SPDYE4A6NLX3 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
SPDYE4A6NLX3 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SPDYE4A6NLX3 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SPDYE4A6NLX3 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC20.18■□□□□ 0.82
SPDYE4A6NLX3 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC20.18■□□□□ 0.82
SPDYE4A6NLX3 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SPDYE4A6NLX3 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SPDYE4A6NLX3 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC20.18■□□□□ 0.82
SPDYE4A6NLX3 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC20.18■□□□□ 0.82
SPDYE4A6NLX3 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SPDYE4A6NLX3 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SPDYE4A6NLX3 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC20.18■□□□□ 0.82
SPDYE4A6NLX3 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SPDYE4A6NLX3 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
SPDYE4A6NLX3 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC20.18■□□□□ 0.82
SPDYE4A6NLX3 ZNF444P1-201ENST00000559497 298 ntBASIC20.18■□□□□ 0.82
SPDYE4A6NLX3 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SPDYE4A6NLX3 AL691432.3-201ENST00000621860 400 ntBASIC20.18■□□□□ 0.82
SPDYE4A6NLX3 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC20.18■□□□□ 0.82
SPDYE4A6NLX3 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
SPDYE4A6NLX3 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC20.18■□□□□ 0.82
SPDYE4A6NLX3 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC20.18■□□□□ 0.82
SPDYE4A6NLX3 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SPDYE4A6NLX3 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC20.18■□□□□ 0.82
SPDYE4A6NLX3 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC20.18■□□□□ 0.82
SPDYE4A6NLX3 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
SPDYE4A6NLX3 KRT8P11-201ENST00000409686 1436 ntBASIC20.18■□□□□ 0.82
SPDYE4A6NLX3 LINC01311-201ENST00000565162 1445 ntBASIC20.18■□□□□ 0.82
SPDYE4A6NLX3 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
SPDYE4A6NLX3 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SPDYE4A6NLX3 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SPDYE4A6NLX3 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SPDYE4A6NLX3 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SPDYE4A6NLX3 AC068418.2-201ENST00000577309 3703 ntBASIC20.17■□□□□ 0.82
SPDYE4A6NLX3 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC20.17■□□□□ 0.82
SPDYE4A6NLX3 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
SPDYE4A6NLX3 RTN1-203ENST00000395090 1609 ntTSL 2 BASIC20.17■□□□□ 0.82
SPDYE4A6NLX3 UBALD1-205ENST00000590891 2641 ntBASIC20.17■□□□□ 0.82
SPDYE4A6NLX3 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SPDYE4A6NLX3 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
SPDYE4A6NLX3 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
SPDYE4A6NLX3 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SPDYE4A6NLX3 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SPDYE4A6NLX3 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
SPDYE4A6NLX3 BUB3-202ENST00000368859 667 ntTSL 3 BASIC20.17■□□□□ 0.82
SPDYE4A6NLX3 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
SPDYE4A6NLX3 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC20.17■□□□□ 0.82
SPDYE4A6NLX3 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SPDYE4A6NLX3 AC116407.4-201ENST00000623319 1061 ntBASIC20.17■□□□□ 0.82
SPDYE4A6NLX3 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms