Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
TMEM235A6NFC5 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
TMEM235A6NFC5 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TMEM235A6NFC5 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC15.24■□□□□ 0.03
TMEM235A6NFC5 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
TMEM235A6NFC5 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
TMEM235A6NFC5 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TMEM235A6NFC5 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TMEM235A6NFC5 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TMEM235A6NFC5 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC15.24■□□□□ 0.03
TMEM235A6NFC5 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TMEM235A6NFC5 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC15.24■□□□□ 0.03
TMEM235A6NFC5 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC15.24■□□□□ 0.03
TMEM235A6NFC5 AC097488.1-201ENST00000507834 756 ntBASIC15.24■□□□□ 0.03
TMEM235A6NFC5 AC090192.1-201ENST00000517740 490 ntBASIC15.24■□□□□ 0.03
TMEM235A6NFC5 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC15.24■□□□□ 0.03
TMEM235A6NFC5 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
TMEM235A6NFC5 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TMEM235A6NFC5 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
TMEM235A6NFC5 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TMEM235A6NFC5 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TMEM235A6NFC5 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TMEM235A6NFC5 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
TMEM235A6NFC5 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC15.24■□□□□ 0.03
TMEM235A6NFC5 HLA-J-201ENST00000462773 1622 ntBASIC15.24■□□□□ 0.03
TMEM235A6NFC5 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TMEM235A6NFC5 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
TMEM235A6NFC5 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
TMEM235A6NFC5 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC15.24■□□□□ 0.03
TMEM235A6NFC5 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TMEM235A6NFC5 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
TMEM235A6NFC5 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
TMEM235A6NFC5 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TMEM235A6NFC5 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC15.23■□□□□ 0.03
TMEM235A6NFC5 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TMEM235A6NFC5 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC15.23■□□□□ 0.03
TMEM235A6NFC5 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TMEM235A6NFC5 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC15.23■□□□□ 0.03
TMEM235A6NFC5 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
TMEM235A6NFC5 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
TMEM235A6NFC5 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC15.23■□□□□ 0.03
TMEM235A6NFC5 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC15.23■□□□□ 0.03
TMEM235A6NFC5 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC15.23■□□□□ 0.03
TMEM235A6NFC5 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TMEM235A6NFC5 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC15.23■□□□□ 0.03
TMEM235A6NFC5 KRT18P6-201ENST00000555540 1265 ntBASIC15.23■□□□□ 0.03
TMEM235A6NFC5 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TMEM235A6NFC5 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
TMEM235A6NFC5 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC15.23■□□□□ 0.03
TMEM235A6NFC5 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
TMEM235A6NFC5 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TMEM235A6NFC5 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC15.23■□□□□ 0.03
TMEM235A6NFC5 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
TMEM235A6NFC5 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
TMEM235A6NFC5 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TMEM235A6NFC5 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TMEM235A6NFC5 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TMEM235A6NFC5 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
TMEM235A6NFC5 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC15.23■□□□□ 0.03
TMEM235A6NFC5 AC106886.4-201ENST00000623557 2502 ntBASIC15.22■□□□□ 0.03
TMEM235A6NFC5 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TMEM235A6NFC5 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
TMEM235A6NFC5 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC15.22■□□□□ 0.03
TMEM235A6NFC5 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TMEM235A6NFC5 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
TMEM235A6NFC5 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC15.22■□□□□ 0.03
TMEM235A6NFC5 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
TMEM235A6NFC5 SRI-203ENST00000419179 1307 ntTSL 2 BASIC15.22■□□□□ 0.03
TMEM235A6NFC5 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TMEM235A6NFC5 TPR-209ENST00000613151 2478 ntTSL 5 BASIC15.22■□□□□ 0.03
TMEM235A6NFC5 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
TMEM235A6NFC5 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC15.22■□□□□ 0.03
TMEM235A6NFC5 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TMEM235A6NFC5 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TMEM235A6NFC5 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC15.22■□□□□ 0.03
TMEM235A6NFC5 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TMEM235A6NFC5 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TMEM235A6NFC5 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
TMEM235A6NFC5 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC15.22■□□□□ 0.03
TMEM235A6NFC5 SAPCD2P4-201ENST00000424595 1171 ntBASIC15.22■□□□□ 0.03
TMEM235A6NFC5 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TMEM235A6NFC5 AC128676.1-201ENST00000454392 318 ntBASIC15.22■□□□□ 0.03
TMEM235A6NFC5 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC15.22■□□□□ 0.03
TMEM235A6NFC5 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TMEM235A6NFC5 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC15.22■□□□□ 0.03
TMEM235A6NFC5 CD177P1-201ENST00000606252 935 ntBASIC15.22■□□□□ 0.03
TMEM235A6NFC5 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC15.22■□□□□ 0.03
TMEM235A6NFC5 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC15.22■□□□□ 0.03
TMEM235A6NFC5 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TMEM235A6NFC5 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TMEM235A6NFC5 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TMEM235A6NFC5 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
TMEM235A6NFC5 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TMEM235A6NFC5 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
TMEM235A6NFC5 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
TMEM235A6NFC5 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
TMEM235A6NFC5 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TMEM235A6NFC5 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC15.22■□□□□ 0.03
TMEM235A6NFC5 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
TMEM235A6NFC5 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms