Protein–RNA interactions for Protein: A6NDB9

PALM3, Paralemmin-3, humanhuman

Predicted RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PALM3A6NDB9 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PALM3A6NDB9 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC20.56■□□□□ 0.88
PALM3A6NDB9 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PALM3A6NDB9 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
PALM3A6NDB9 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
PALM3A6NDB9 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
PALM3A6NDB9 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
PALM3A6NDB9 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PALM3A6NDB9 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PALM3A6NDB9 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PALM3A6NDB9 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
PALM3A6NDB9 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC20.55■□□□□ 0.88
PALM3A6NDB9 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PALM3A6NDB9 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
PALM3A6NDB9 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC20.55■□□□□ 0.88
PALM3A6NDB9 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PALM3A6NDB9 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
PALM3A6NDB9 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC20.55■□□□□ 0.88
PALM3A6NDB9 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PALM3A6NDB9 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
PALM3A6NDB9 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC20.55■□□□□ 0.88
PALM3A6NDB9 TPM4P1-201ENST00000436100 807 ntBASIC20.55■□□□□ 0.88
PALM3A6NDB9 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC20.55■□□□□ 0.88
PALM3A6NDB9 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC20.55■□□□□ 0.88
PALM3A6NDB9 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PALM3A6NDB9 TMED1-207ENST00000591695 809 ntTSL 5 BASIC20.55■□□□□ 0.88
PALM3A6NDB9 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PALM3A6NDB9 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC20.55■□□□□ 0.88
PALM3A6NDB9 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC20.55■□□□□ 0.88
PALM3A6NDB9 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
PALM3A6NDB9 AP000867.4-201ENST00000641616 219 ntBASIC20.55■□□□□ 0.88
PALM3A6NDB9 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
PALM3A6NDB9 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
PALM3A6NDB9 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC20.55■□□□□ 0.88
PALM3A6NDB9 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC20.55■□□□□ 0.88
PALM3A6NDB9 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PALM3A6NDB9 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
PALM3A6NDB9 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PALM3A6NDB9 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PALM3A6NDB9 AL049757.1-201ENST00000616842 1596 ntBASIC20.55■□□□□ 0.88
PALM3A6NDB9 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PALM3A6NDB9 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PALM3A6NDB9 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
PALM3A6NDB9 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
PALM3A6NDB9 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
PALM3A6NDB9 AP005117.1-201ENST00000584346 1413 ntBASIC20.54■□□□□ 0.88
PALM3A6NDB9 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
PALM3A6NDB9 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC20.54■□□□□ 0.88
PALM3A6NDB9 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PALM3A6NDB9 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PALM3A6NDB9 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PALM3A6NDB9 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC20.54■□□□□ 0.88
PALM3A6NDB9 AC004870.1-201ENST00000315132 882 ntBASIC20.54■□□□□ 0.88
PALM3A6NDB9 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PALM3A6NDB9 AC103564.2-201ENST00000432853 1299 ntBASIC20.54■□□□□ 0.88
PALM3A6NDB9 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC20.54■□□□□ 0.88
PALM3A6NDB9 FAAHP1-202ENST00000446499 1238 ntBASIC20.54■□□□□ 0.88
PALM3A6NDB9 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC20.54■□□□□ 0.88
PALM3A6NDB9 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC20.54■□□□□ 0.88
PALM3A6NDB9 AC104692.2-201ENST00000603054 253 ntBASIC20.54■□□□□ 0.88
PALM3A6NDB9 AC019129.2-201ENST00000609837 1235 ntBASIC20.54■□□□□ 0.88
PALM3A6NDB9 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
PALM3A6NDB9 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PALM3A6NDB9 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
PALM3A6NDB9 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC20.54■□□□□ 0.88
PALM3A6NDB9 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PALM3A6NDB9 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PALM3A6NDB9 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC20.54■□□□□ 0.88
PALM3A6NDB9 HARS-201ENST00000307633 1780 ntTSL 2 BASIC20.54■□□□□ 0.88
PALM3A6NDB9 SIRPAP1-201ENST00000448467 1770 ntBASIC20.54■□□□□ 0.88
PALM3A6NDB9 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PALM3A6NDB9 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PALM3A6NDB9 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PALM3A6NDB9 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC20.54■□□□□ 0.88
PALM3A6NDB9 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
PALM3A6NDB9 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PALM3A6NDB9 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC20.53■□□□□ 0.88
PALM3A6NDB9 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC20.53■□□□□ 0.88
PALM3A6NDB9 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PALM3A6NDB9 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
PALM3A6NDB9 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC20.53■□□□□ 0.88
PALM3A6NDB9 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC20.53■□□□□ 0.88
PALM3A6NDB9 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
PALM3A6NDB9 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PALM3A6NDB9 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
PALM3A6NDB9 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PALM3A6NDB9 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
PALM3A6NDB9 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
PALM3A6NDB9 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC20.53■□□□□ 0.88
PALM3A6NDB9 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
PALM3A6NDB9 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PALM3A6NDB9 AC079781.3-201ENST00000449110 356 ntBASIC20.53■□□□□ 0.88
PALM3A6NDB9 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC20.53■□□□□ 0.88
PALM3A6NDB9 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC20.53■□□□□ 0.88
PALM3A6NDB9 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC20.53■□□□□ 0.88
PALM3A6NDB9 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PALM3A6NDB9 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PALM3A6NDB9 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PALM3A6NDB9 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
PALM3A6NDB9 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms