Protein–RNA interactions for Protein: A0A0B4J2F2

LOC102724428, SNF1-like kinase, isoform CRA_a, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC102724428A0A0B4J2F2 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC22.53■■□□□ 1.2
LOC102724428A0A0B4J2F2 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
LOC102724428A0A0B4J2F2 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
LOC102724428A0A0B4J2F2 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
LOC102724428A0A0B4J2F2 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
LOC102724428A0A0B4J2F2 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC22.53■■□□□ 1.2
LOC102724428A0A0B4J2F2 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
LOC102724428A0A0B4J2F2 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
LOC102724428A0A0B4J2F2 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
LOC102724428A0A0B4J2F2 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
LOC102724428A0A0B4J2F2 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
LOC102724428A0A0B4J2F2 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
LOC102724428A0A0B4J2F2 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
LOC102724428A0A0B4J2F2 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC22.52■■□□□ 1.2
LOC102724428A0A0B4J2F2 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC22.52■■□□□ 1.2
LOC102724428A0A0B4J2F2 STK19B-204ENST00000512515 211 ntBASIC22.52■■□□□ 1.2
LOC102724428A0A0B4J2F2 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC22.52■■□□□ 1.2
LOC102724428A0A0B4J2F2 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC22.52■■□□□ 1.2
LOC102724428A0A0B4J2F2 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
LOC102724428A0A0B4J2F2 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
LOC102724428A0A0B4J2F2 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
LOC102724428A0A0B4J2F2 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
LOC102724428A0A0B4J2F2 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
LOC102724428A0A0B4J2F2 PC-208ENST00000529047 1607 ntTSL 3 BASIC22.52■■□□□ 1.2
LOC102724428A0A0B4J2F2 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
LOC102724428A0A0B4J2F2 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
LOC102724428A0A0B4J2F2 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
LOC102724428A0A0B4J2F2 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
LOC102724428A0A0B4J2F2 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
LOC102724428A0A0B4J2F2 GOLGA6L17P-202ENST00000614358 1398 ntBASIC22.51■■□□□ 1.19
LOC102724428A0A0B4J2F2 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
LOC102724428A0A0B4J2F2 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
LOC102724428A0A0B4J2F2 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
LOC102724428A0A0B4J2F2 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
LOC102724428A0A0B4J2F2 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC22.51■■□□□ 1.19
LOC102724428A0A0B4J2F2 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
LOC102724428A0A0B4J2F2 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC22.51■■□□□ 1.19
LOC102724428A0A0B4J2F2 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
LOC102724428A0A0B4J2F2 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
LOC102724428A0A0B4J2F2 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
LOC102724428A0A0B4J2F2 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
LOC102724428A0A0B4J2F2 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC22.51■■□□□ 1.19
LOC102724428A0A0B4J2F2 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC22.51■■□□□ 1.19
LOC102724428A0A0B4J2F2 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
LOC102724428A0A0B4J2F2 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC22.51■■□□□ 1.19
LOC102724428A0A0B4J2F2 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
LOC102724428A0A0B4J2F2 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC22.51■■□□□ 1.19
LOC102724428A0A0B4J2F2 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC22.51■■□□□ 1.19
LOC102724428A0A0B4J2F2 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC22.51■■□□□ 1.19
LOC102724428A0A0B4J2F2 AC092902.6-201ENST00000641783 218 ntBASIC22.51■■□□□ 1.19
LOC102724428A0A0B4J2F2 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
LOC102724428A0A0B4J2F2 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC22.51■■□□□ 1.19
LOC102724428A0A0B4J2F2 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
LOC102724428A0A0B4J2F2 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
LOC102724428A0A0B4J2F2 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
LOC102724428A0A0B4J2F2 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
LOC102724428A0A0B4J2F2 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC22.51■■□□□ 1.19
LOC102724428A0A0B4J2F2 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC22.51■■□□□ 1.19
LOC102724428A0A0B4J2F2 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC22.51■■□□□ 1.19
LOC102724428A0A0B4J2F2 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC22.5■■□□□ 1.19
LOC102724428A0A0B4J2F2 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
LOC102724428A0A0B4J2F2 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC22.5■■□□□ 1.19
LOC102724428A0A0B4J2F2 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
LOC102724428A0A0B4J2F2 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC22.5■■□□□ 1.19
LOC102724428A0A0B4J2F2 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
LOC102724428A0A0B4J2F2 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
LOC102724428A0A0B4J2F2 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
LOC102724428A0A0B4J2F2 LINC00982-205ENST00000420957 435 ntBASIC22.5■■□□□ 1.19
LOC102724428A0A0B4J2F2 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC22.5■■□□□ 1.19
LOC102724428A0A0B4J2F2 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC22.5■■□□□ 1.19
LOC102724428A0A0B4J2F2 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC22.5■■□□□ 1.19
LOC102724428A0A0B4J2F2 RPL28-205ENST00000558131 444 ntTSL 5 BASIC22.5■■□□□ 1.19
LOC102724428A0A0B4J2F2 AC023141.13-201ENST00000604991 943 ntBASIC22.5■■□□□ 1.19
LOC102724428A0A0B4J2F2 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC22.5■■□□□ 1.19
LOC102724428A0A0B4J2F2 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
LOC102724428A0A0B4J2F2 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC22.5■■□□□ 1.19
LOC102724428A0A0B4J2F2 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
LOC102724428A0A0B4J2F2 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC22.5■■□□□ 1.19
LOC102724428A0A0B4J2F2 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
LOC102724428A0A0B4J2F2 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
LOC102724428A0A0B4J2F2 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
LOC102724428A0A0B4J2F2 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC22.49■■□□□ 1.19
LOC102724428A0A0B4J2F2 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
LOC102724428A0A0B4J2F2 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC22.49■■□□□ 1.19
LOC102724428A0A0B4J2F2 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
LOC102724428A0A0B4J2F2 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
LOC102724428A0A0B4J2F2 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
LOC102724428A0A0B4J2F2 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
LOC102724428A0A0B4J2F2 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
LOC102724428A0A0B4J2F2 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC22.49■■□□□ 1.19
LOC102724428A0A0B4J2F2 BCRP1-201ENST00000444246 691 ntBASIC22.49■■□□□ 1.19
LOC102724428A0A0B4J2F2 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC22.49■■□□□ 1.19
LOC102724428A0A0B4J2F2 LHX6-205ENST00000464484 666 ntTSL 2 BASIC22.49■■□□□ 1.19
LOC102724428A0A0B4J2F2 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC22.49■■□□□ 1.19
LOC102724428A0A0B4J2F2 AC004835.2-201ENST00000603762 682 ntBASIC22.49■■□□□ 1.19
LOC102724428A0A0B4J2F2 AC007064.4-201ENST00000637740 555 ntBASIC22.49■■□□□ 1.19
LOC102724428A0A0B4J2F2 AIRN-201ENST00000601203 4374 ntBASIC22.49■■□□□ 1.19
LOC102724428A0A0B4J2F2 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
LOC102724428A0A0B4J2F2 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC22.49■■□□□ 1.19
LOC102724428A0A0B4J2F2 AC009336.1-201ENST00000608941 1553 ntBASIC22.49■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms