Protein–RNA interactions for Protein: Q9Y663

HS3ST3A1, Heparan sulfate glucosamine 3-O-sulfotransferase 3A1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HS3ST3A1Q9Y663 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
HS3ST3A1Q9Y663 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
HS3ST3A1Q9Y663 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
HS3ST3A1Q9Y663 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HS3ST3A1Q9Y663 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HS3ST3A1Q9Y663 AC003669.1-201ENST00000334569 611 ntBASIC17.42■□□□□ 0.38
HS3ST3A1Q9Y663 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HS3ST3A1Q9Y663 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC17.42■□□□□ 0.38
HS3ST3A1Q9Y663 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HS3ST3A1Q9Y663 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC17.42■□□□□ 0.38
HS3ST3A1Q9Y663 LBH-204ENST00000406087 559 ntTSL 4 BASIC17.42■□□□□ 0.38
HS3ST3A1Q9Y663 KRT18P27-201ENST00000427733 1299 ntBASIC17.42■□□□□ 0.38
HS3ST3A1Q9Y663 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC17.42■□□□□ 0.38
HS3ST3A1Q9Y663 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC17.42■□□□□ 0.38
HS3ST3A1Q9Y663 AL591424.1-201ENST00000442569 1213 ntBASIC17.42■□□□□ 0.38
HS3ST3A1Q9Y663 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC17.42■□□□□ 0.38
HS3ST3A1Q9Y663 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
HS3ST3A1Q9Y663 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC17.42■□□□□ 0.38
HS3ST3A1Q9Y663 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC17.42■□□□□ 0.38
HS3ST3A1Q9Y663 UNC93B6-202ENST00000528242 690 ntBASIC17.42■□□□□ 0.38
HS3ST3A1Q9Y663 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC17.42■□□□□ 0.38
HS3ST3A1Q9Y663 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HS3ST3A1Q9Y663 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HS3ST3A1Q9Y663 AC019129.2-201ENST00000609837 1235 ntBASIC17.42■□□□□ 0.38
HS3ST3A1Q9Y663 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HS3ST3A1Q9Y663 MIR1199-201ENST00000621445 119 ntBASIC17.42■□□□□ 0.38
HS3ST3A1Q9Y663 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC17.42■□□□□ 0.38
HS3ST3A1Q9Y663 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC17.42■□□□□ 0.38
HS3ST3A1Q9Y663 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HS3ST3A1Q9Y663 AC004817.3-201ENST00000602957 2129 ntBASIC17.42■□□□□ 0.38
HS3ST3A1Q9Y663 AP002414.3-201ENST00000589352 1468 ntBASIC17.42■□□□□ 0.38
HS3ST3A1Q9Y663 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
HS3ST3A1Q9Y663 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HS3ST3A1Q9Y663 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HS3ST3A1Q9Y663 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC17.42■□□□□ 0.38
HS3ST3A1Q9Y663 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HS3ST3A1Q9Y663 FUT8-AS1-201ENST00000621019 1521 ntBASIC17.42■□□□□ 0.38
HS3ST3A1Q9Y663 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HS3ST3A1Q9Y663 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC17.42■□□□□ 0.38
HS3ST3A1Q9Y663 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
HS3ST3A1Q9Y663 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC17.41■□□□□ 0.38
HS3ST3A1Q9Y663 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HS3ST3A1Q9Y663 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HS3ST3A1Q9Y663 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
HS3ST3A1Q9Y663 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HS3ST3A1Q9Y663 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC17.41■□□□□ 0.38
HS3ST3A1Q9Y663 PC-208ENST00000529047 1607 ntTSL 3 BASIC17.41■□□□□ 0.38
HS3ST3A1Q9Y663 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HS3ST3A1Q9Y663 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HS3ST3A1Q9Y663 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
HS3ST3A1Q9Y663 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HS3ST3A1Q9Y663 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
HS3ST3A1Q9Y663 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
HS3ST3A1Q9Y663 MIR940-201ENST00000401276 94 ntBASIC17.41■□□□□ 0.38
HS3ST3A1Q9Y663 SIGLEC30P-201ENST00000455569 941 ntBASIC17.41■□□□□ 0.38
HS3ST3A1Q9Y663 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
HS3ST3A1Q9Y663 AC109462.3-201ENST00000573934 613 ntBASIC17.41■□□□□ 0.38
HS3ST3A1Q9Y663 CYGB-205ENST00000590175 830 ntTSL 3 BASIC17.41■□□□□ 0.38
HS3ST3A1Q9Y663 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HS3ST3A1Q9Y663 COPE-211ENST00000600932 1144 ntTSL 5 BASIC17.41■□□□□ 0.38
HS3ST3A1Q9Y663 AL356488.2-201ENST00000602755 427 ntBASIC17.41■□□□□ 0.38
HS3ST3A1Q9Y663 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
HS3ST3A1Q9Y663 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HS3ST3A1Q9Y663 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HS3ST3A1Q9Y663 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HS3ST3A1Q9Y663 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
HS3ST3A1Q9Y663 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HS3ST3A1Q9Y663 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
HS3ST3A1Q9Y663 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HS3ST3A1Q9Y663 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC17.41■□□□□ 0.38
HS3ST3A1Q9Y663 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC17.41■□□□□ 0.38
HS3ST3A1Q9Y663 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HS3ST3A1Q9Y663 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC17.41■□□□□ 0.38
HS3ST3A1Q9Y663 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC17.41■□□□□ 0.38
HS3ST3A1Q9Y663 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
HS3ST3A1Q9Y663 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC17.4■□□□□ 0.38
HS3ST3A1Q9Y663 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
HS3ST3A1Q9Y663 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC17.4■□□□□ 0.38
HS3ST3A1Q9Y663 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HS3ST3A1Q9Y663 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
HS3ST3A1Q9Y663 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC17.4■□□□□ 0.38
HS3ST3A1Q9Y663 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HS3ST3A1Q9Y663 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HS3ST3A1Q9Y663 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC17.4■□□□□ 0.38
HS3ST3A1Q9Y663 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HS3ST3A1Q9Y663 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC17.4■□□□□ 0.38
HS3ST3A1Q9Y663 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HS3ST3A1Q9Y663 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HS3ST3A1Q9Y663 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
HS3ST3A1Q9Y663 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC17.4■□□□□ 0.38
HS3ST3A1Q9Y663 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HS3ST3A1Q9Y663 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HS3ST3A1Q9Y663 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HS3ST3A1Q9Y663 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC17.4■□□□□ 0.38
HS3ST3A1Q9Y663 AC073621.1-201ENST00000392730 636 ntBASIC17.4■□□□□ 0.38
HS3ST3A1Q9Y663 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC17.4■□□□□ 0.38
HS3ST3A1Q9Y663 IGHV3-52-201ENST00000519770 353 ntBASIC17.4■□□□□ 0.38
HS3ST3A1Q9Y663 ETFA-208ENST00000559602 792 ntTSL 3 BASIC17.4■□□□□ 0.38
HS3ST3A1Q9Y663 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
HS3ST3A1Q9Y663 SDCCAG3P1-201ENST00000589292 1150 ntBASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms