Protein–RNA interactions for Protein: Q9Y5G1

PCDHGB3, Protocadherin gamma-B3, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3Q9Y5G1 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC16.97■□□□□ 0.31
PCDHGB3Q9Y5G1 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCDHGB3Q9Y5G1 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCDHGB3Q9Y5G1 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCDHGB3Q9Y5G1 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PCDHGB3Q9Y5G1 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PCDHGB3Q9Y5G1 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCDHGB3Q9Y5G1 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PCDHGB3Q9Y5G1 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PCDHGB3Q9Y5G1 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC16.97■□□□□ 0.31
PCDHGB3Q9Y5G1 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC16.97■□□□□ 0.31
PCDHGB3Q9Y5G1 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC16.97■□□□□ 0.31
PCDHGB3Q9Y5G1 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC16.97■□□□□ 0.31
PCDHGB3Q9Y5G1 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCDHGB3Q9Y5G1 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCDHGB3Q9Y5G1 MIR3917-201ENST00000580971 93 ntBASIC16.97■□□□□ 0.31
PCDHGB3Q9Y5G1 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
PCDHGB3Q9Y5G1 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC16.97■□□□□ 0.31
PCDHGB3Q9Y5G1 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PCDHGB3Q9Y5G1 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC16.97■□□□□ 0.31
PCDHGB3Q9Y5G1 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCDHGB3Q9Y5G1 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
PCDHGB3Q9Y5G1 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
PCDHGB3Q9Y5G1 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCDHGB3Q9Y5G1 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PCDHGB3Q9Y5G1 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
PCDHGB3Q9Y5G1 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.97■□□□□ 0.31
PCDHGB3Q9Y5G1 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCDHGB3Q9Y5G1 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC16.97■□□□□ 0.31
PCDHGB3Q9Y5G1 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCDHGB3Q9Y5G1 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PCDHGB3Q9Y5G1 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
PCDHGB3Q9Y5G1 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PCDHGB3Q9Y5G1 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCDHGB3Q9Y5G1 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCDHGB3Q9Y5G1 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCDHGB3Q9Y5G1 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PCDHGB3Q9Y5G1 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PCDHGB3Q9Y5G1 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC16.96■□□□□ 0.31
PCDHGB3Q9Y5G1 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.96■□□□□ 0.31
PCDHGB3Q9Y5G1 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
PCDHGB3Q9Y5G1 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PCDHGB3Q9Y5G1 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PCDHGB3Q9Y5G1 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
PCDHGB3Q9Y5G1 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PCDHGB3Q9Y5G1 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PCDHGB3Q9Y5G1 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PCDHGB3Q9Y5G1 ISCU-203ENST00000431221 799 ntTSL 2 BASIC16.96■□□□□ 0.31
PCDHGB3Q9Y5G1 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC16.96■□□□□ 0.31
PCDHGB3Q9Y5G1 AL441883.1-201ENST00000566170 1045 ntBASIC16.96■□□□□ 0.31
PCDHGB3Q9Y5G1 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC16.96■□□□□ 0.31
PCDHGB3Q9Y5G1 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC16.96■□□□□ 0.31
PCDHGB3Q9Y5G1 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PCDHGB3Q9Y5G1 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
PCDHGB3Q9Y5G1 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PCDHGB3Q9Y5G1 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC16.96■□□□□ 0.31
PCDHGB3Q9Y5G1 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PCDHGB3Q9Y5G1 NARF-204ENST00000390006 1766 ntTSL 2 BASIC16.96■□□□□ 0.31
PCDHGB3Q9Y5G1 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PCDHGB3Q9Y5G1 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC16.96■□□□□ 0.31
PCDHGB3Q9Y5G1 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PCDHGB3Q9Y5G1 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC16.96■□□□□ 0.3
PCDHGB3Q9Y5G1 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
PCDHGB3Q9Y5G1 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
PCDHGB3Q9Y5G1 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
PCDHGB3Q9Y5G1 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
PCDHGB3Q9Y5G1 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
PCDHGB3Q9Y5G1 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
PCDHGB3Q9Y5G1 AC012313.1-201ENST00000593393 3059 ntBASIC16.95■□□□□ 0.3
PCDHGB3Q9Y5G1 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PCDHGB3Q9Y5G1 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PCDHGB3Q9Y5G1 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC16.95■□□□□ 0.3
PCDHGB3Q9Y5G1 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PCDHGB3Q9Y5G1 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PCDHGB3Q9Y5G1 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
PCDHGB3Q9Y5G1 AC006116.8-202ENST00000587620 1550 ntBASIC16.95■□□□□ 0.3
PCDHGB3Q9Y5G1 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
PCDHGB3Q9Y5G1 STARP1-201ENST00000397973 869 ntBASIC16.95■□□□□ 0.3
PCDHGB3Q9Y5G1 DAP-202ENST00000432074 1048 ntTSL 2 BASIC16.95■□□□□ 0.3
PCDHGB3Q9Y5G1 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC16.95■□□□□ 0.3
PCDHGB3Q9Y5G1 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC16.95■□□□□ 0.3
PCDHGB3Q9Y5G1 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
PCDHGB3Q9Y5G1 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC16.95■□□□□ 0.3
PCDHGB3Q9Y5G1 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC16.95■□□□□ 0.3
PCDHGB3Q9Y5G1 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PCDHGB3Q9Y5G1 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
PCDHGB3Q9Y5G1 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PCDHGB3Q9Y5G1 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC16.95■□□□□ 0.3
PCDHGB3Q9Y5G1 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PCDHGB3Q9Y5G1 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC16.95■□□□□ 0.3
PCDHGB3Q9Y5G1 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC16.95■□□□□ 0.3
PCDHGB3Q9Y5G1 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PCDHGB3Q9Y5G1 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
PCDHGB3Q9Y5G1 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
PCDHGB3Q9Y5G1 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC16.95■□□□□ 0.3
PCDHGB3Q9Y5G1 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PCDHGB3Q9Y5G1 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC16.95■□□□□ 0.3
PCDHGB3Q9Y5G1 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
PCDHGB3Q9Y5G1 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
PCDHGB3Q9Y5G1 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms