Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC21.49■■□□□ 1.03
ZC3H4Q9UPT8 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
ZC3H4Q9UPT8 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC21.48■■□□□ 1.03
ZC3H4Q9UPT8 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
ZC3H4Q9UPT8 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
ZC3H4Q9UPT8 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC21.48■■□□□ 1.03
ZC3H4Q9UPT8 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
ZC3H4Q9UPT8 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC21.48■■□□□ 1.03
ZC3H4Q9UPT8 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
ZC3H4Q9UPT8 AC025580.3-201ENST00000617932 1424 ntBASIC21.48■■□□□ 1.03
ZC3H4Q9UPT8 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC21.48■■□□□ 1.03
ZC3H4Q9UPT8 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC21.48■■□□□ 1.03
ZC3H4Q9UPT8 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
ZC3H4Q9UPT8 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
ZC3H4Q9UPT8 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
ZC3H4Q9UPT8 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC21.48■■□□□ 1.03
ZC3H4Q9UPT8 EDF1-203ENST00000371649 790 ntTSL 2 BASIC21.48■■□□□ 1.03
ZC3H4Q9UPT8 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
ZC3H4Q9UPT8 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC21.48■■□□□ 1.03
ZC3H4Q9UPT8 AC002472.2-201ENST00000442739 958 ntBASIC21.48■■□□□ 1.03
ZC3H4Q9UPT8 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC21.48■■□□□ 1.03
ZC3H4Q9UPT8 OARD1-208ENST00000469104 704 ntTSL 2 BASIC21.48■■□□□ 1.03
ZC3H4Q9UPT8 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
ZC3H4Q9UPT8 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC21.48■■□□□ 1.03
ZC3H4Q9UPT8 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC21.48■■□□□ 1.03
ZC3H4Q9UPT8 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
ZC3H4Q9UPT8 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC21.48■■□□□ 1.03
ZC3H4Q9UPT8 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC21.48■■□□□ 1.03
ZC3H4Q9UPT8 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
ZC3H4Q9UPT8 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
ZC3H4Q9UPT8 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
ZC3H4Q9UPT8 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
ZC3H4Q9UPT8 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
ZC3H4Q9UPT8 REM2-202ENST00000536884 1331 ntTSL 2 BASIC21.47■■□□□ 1.03
ZC3H4Q9UPT8 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC21.47■■□□□ 1.03
ZC3H4Q9UPT8 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC21.47■■□□□ 1.03
ZC3H4Q9UPT8 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
ZC3H4Q9UPT8 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC21.47■■□□□ 1.03
ZC3H4Q9UPT8 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
ZC3H4Q9UPT8 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC21.47■■□□□ 1.03
ZC3H4Q9UPT8 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
ZC3H4Q9UPT8 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
ZC3H4Q9UPT8 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
ZC3H4Q9UPT8 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
ZC3H4Q9UPT8 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
ZC3H4Q9UPT8 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
ZC3H4Q9UPT8 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
ZC3H4Q9UPT8 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC21.47■■□□□ 1.03
ZC3H4Q9UPT8 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC21.47■■□□□ 1.03
ZC3H4Q9UPT8 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
ZC3H4Q9UPT8 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
ZC3H4Q9UPT8 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC21.47■■□□□ 1.03
ZC3H4Q9UPT8 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
ZC3H4Q9UPT8 HLA-V-201ENST00000429037 534 ntBASIC21.47■■□□□ 1.03
ZC3H4Q9UPT8 CYB561-217ENST00000582997 877 ntTSL 5 BASIC21.47■■□□□ 1.03
ZC3H4Q9UPT8 AC068137.2-201ENST00000605408 478 ntBASIC21.47■■□□□ 1.03
ZC3H4Q9UPT8 GGTLC5P-201ENST00000617623 998 ntBASIC21.47■■□□□ 1.03
ZC3H4Q9UPT8 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC21.47■■□□□ 1.03
ZC3H4Q9UPT8 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
ZC3H4Q9UPT8 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
ZC3H4Q9UPT8 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC21.46■■□□□ 1.03
ZC3H4Q9UPT8 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC21.46■■□□□ 1.03
ZC3H4Q9UPT8 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
ZC3H4Q9UPT8 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
ZC3H4Q9UPT8 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC21.46■■□□□ 1.03
ZC3H4Q9UPT8 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
ZC3H4Q9UPT8 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
ZC3H4Q9UPT8 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
ZC3H4Q9UPT8 GID4-202ENST00000376345 1391 ntTSL 3 BASIC21.46■■□□□ 1.03
ZC3H4Q9UPT8 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
ZC3H4Q9UPT8 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
ZC3H4Q9UPT8 BASP1P1-201ENST00000430708 665 ntBASIC21.46■■□□□ 1.03
ZC3H4Q9UPT8 FAM207CP-201ENST00000443486 507 ntBASIC21.46■■□□□ 1.03
ZC3H4Q9UPT8 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC21.46■■□□□ 1.03
ZC3H4Q9UPT8 DUX4L17-201ENST00000557360 1267 ntBASIC21.46■■□□□ 1.03
ZC3H4Q9UPT8 PWWP2AP1-201ENST00000429776 2273 ntBASIC21.46■■□□□ 1.03
ZC3H4Q9UPT8 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
ZC3H4Q9UPT8 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
ZC3H4Q9UPT8 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
ZC3H4Q9UPT8 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
ZC3H4Q9UPT8 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC21.45■■□□□ 1.03
ZC3H4Q9UPT8 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC21.45■■□□□ 1.03
ZC3H4Q9UPT8 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC21.45■■□□□ 1.03
ZC3H4Q9UPT8 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
ZC3H4Q9UPT8 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC21.45■■□□□ 1.02
ZC3H4Q9UPT8 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
ZC3H4Q9UPT8 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC21.45■■□□□ 1.02
ZC3H4Q9UPT8 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
ZC3H4Q9UPT8 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
ZC3H4Q9UPT8 LINC01126-201ENST00000623515 1646 ntBASIC21.45■■□□□ 1.02
ZC3H4Q9UPT8 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
ZC3H4Q9UPT8 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
ZC3H4Q9UPT8 AC236430.1-201ENST00000402231 743 ntBASIC21.45■■□□□ 1.02
ZC3H4Q9UPT8 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC21.45■■□□□ 1.02
ZC3H4Q9UPT8 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC21.45■■□□□ 1.02
ZC3H4Q9UPT8 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC21.45■■□□□ 1.02
ZC3H4Q9UPT8 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC21.45■■□□□ 1.02
ZC3H4Q9UPT8 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC21.45■■□□□ 1.02
ZC3H4Q9UPT8 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC21.45■■□□□ 1.02
ZC3H4Q9UPT8 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms