Protein–RNA interactions for Protein: Q9ULB4

CDH9, Cadherin-9, humanhuman

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9Q9ULB4 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDH9Q9ULB4 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CDH9Q9ULB4 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CDH9Q9ULB4 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDH9Q9ULB4 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDH9Q9ULB4 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDH9Q9ULB4 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC18.83■□□□□ 0.61
CDH9Q9ULB4 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
CDH9Q9ULB4 AP005117.1-201ENST00000584346 1413 ntBASIC18.83■□□□□ 0.61
CDH9Q9ULB4 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CDH9Q9ULB4 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CDH9Q9ULB4 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
CDH9Q9ULB4 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CDH9Q9ULB4 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
CDH9Q9ULB4 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CDH9Q9ULB4 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
CDH9Q9ULB4 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CDH9Q9ULB4 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC18.83■□□□□ 0.6
CDH9Q9ULB4 AC103564.2-201ENST00000432853 1299 ntBASIC18.83■□□□□ 0.6
CDH9Q9ULB4 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC18.83■□□□□ 0.6
CDH9Q9ULB4 SRP19-202ENST00000445150 833 ntTSL 2 BASIC18.83■□□□□ 0.6
CDH9Q9ULB4 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC18.83■□□□□ 0.6
CDH9Q9ULB4 IRF8-202ENST00000562492 946 ntTSL 3 BASIC18.83■□□□□ 0.6
CDH9Q9ULB4 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
CDH9Q9ULB4 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CDH9Q9ULB4 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC18.83■□□□□ 0.6
CDH9Q9ULB4 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CDH9Q9ULB4 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
CDH9Q9ULB4 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CDH9Q9ULB4 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
CDH9Q9ULB4 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CDH9Q9ULB4 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
CDH9Q9ULB4 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC18.83■□□□□ 0.6
CDH9Q9ULB4 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CDH9Q9ULB4 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC18.83■□□□□ 0.6
CDH9Q9ULB4 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CDH9Q9ULB4 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC18.83■□□□□ 0.6
CDH9Q9ULB4 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CDH9Q9ULB4 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CDH9Q9ULB4 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDH9Q9ULB4 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDH9Q9ULB4 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDH9Q9ULB4 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
CDH9Q9ULB4 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDH9Q9ULB4 SOD2-201ENST00000337404 991 ntTSL 2 BASIC18.82■□□□□ 0.6
CDH9Q9ULB4 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC18.82■□□□□ 0.6
CDH9Q9ULB4 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC18.82■□□□□ 0.6
CDH9Q9ULB4 MTDHP3-201ENST00000594186 672 ntBASIC18.82■□□□□ 0.6
CDH9Q9ULB4 VPS51-217ENST00000639871 243 ntTSL 5 BASIC18.82■□□□□ 0.6
CDH9Q9ULB4 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC18.82■□□□□ 0.6
CDH9Q9ULB4 BX276092.7-203ENST00000637198 1536 ntBASIC18.82■□□□□ 0.6
CDH9Q9ULB4 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDH9Q9ULB4 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.82■□□□□ 0.6
CDH9Q9ULB4 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDH9Q9ULB4 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
CDH9Q9ULB4 HLA-DQB1-201ENST00000374943 1656 ntBASIC18.82■□□□□ 0.6
CDH9Q9ULB4 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC18.82■□□□□ 0.6
CDH9Q9ULB4 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDH9Q9ULB4 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDH9Q9ULB4 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDH9Q9ULB4 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
CDH9Q9ULB4 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDH9Q9ULB4 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDH9Q9ULB4 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC18.81■□□□□ 0.6
CDH9Q9ULB4 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDH9Q9ULB4 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC18.81■□□□□ 0.6
CDH9Q9ULB4 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.81■□□□□ 0.6
CDH9Q9ULB4 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC18.81■□□□□ 0.6
CDH9Q9ULB4 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDH9Q9ULB4 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
CDH9Q9ULB4 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDH9Q9ULB4 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDH9Q9ULB4 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC18.81■□□□□ 0.6
CDH9Q9ULB4 AP002469.2-201ENST00000531724 424 ntBASIC18.81■□□□□ 0.6
CDH9Q9ULB4 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC18.81■□□□□ 0.6
CDH9Q9ULB4 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC18.81■□□□□ 0.6
CDH9Q9ULB4 CALM3-211ENST00000598871 561 ntTSL 4 BASIC18.81■□□□□ 0.6
CDH9Q9ULB4 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC18.81■□□□□ 0.6
CDH9Q9ULB4 AP000867.4-201ENST00000641616 219 ntBASIC18.81■□□□□ 0.6
CDH9Q9ULB4 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDH9Q9ULB4 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDH9Q9ULB4 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDH9Q9ULB4 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDH9Q9ULB4 KRT8P10-201ENST00000450021 1447 ntBASIC18.81■□□□□ 0.6
CDH9Q9ULB4 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDH9Q9ULB4 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CDH9Q9ULB4 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDH9Q9ULB4 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
CDH9Q9ULB4 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
CDH9Q9ULB4 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC18.81■□□□□ 0.6
CDH9Q9ULB4 PAN3-AS1-201ENST00000563843 1351 ntBASIC18.81■□□□□ 0.6
CDH9Q9ULB4 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDH9Q9ULB4 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDH9Q9ULB4 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC18.8■□□□□ 0.6
CDH9Q9ULB4 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDH9Q9ULB4 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDH9Q9ULB4 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC18.8■□□□□ 0.6
CDH9Q9ULB4 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDH9Q9ULB4 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
CDH9Q9ULB4 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms